Colossoma macropomum (tambaqui): 118800218
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Entry
118800218 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118800218
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118800218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
PRP1_N
zf-Nse
Peptidase_S46
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
118800218
NCBI-ProteinID:
XP_036416306
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MAEASISVGQDQFSCPVCLDLLKDPVTVPCGHSFCMVCINGCWDQGDQRGVYSCPQCRET
FTPRPVLRRNNMLAEVVDEVKKKLQTAPPAHCYAGPGDVECDFCTGRQHKATKSCLVCQA
SFCETHLKPHYNVPGLKKHKLVEASKQLPVKICSEHDKLIEIYCHTDQQFVCYLCTMDEH
MGHDTVAVVAERKDKQNQLKELQRKSQQRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSER
IFTELIRSIEKKRSEVTELIRAQEEAELSRPEELLEQLQREFADLKRRDTELEQLSHTED
HIHFLQRFQSLCVSSASEDSHSLTLLQRLSFDGLRKSLSDLKERLEEFCKEEFSNISLYN
ERSSSDDEQSLSSMKLPPDMAVHSKLQSREDFLQYFCRLTLDPNTVNQNLSLSEKNKVVT
YGGKNQCYSNHTERFDYWYQVLSKESVSGRCYWEVEWSSEVWGCVYISVSYKRISRKGWG
DECRFGHNNQSWSLCCSPSSLSFYHNNIQSELSASSSSRIGVYVDHSAGTLSFYSVSDTM
TLLHTVHTTFSQPLYAGFMVNLSSVRLCDRK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtaggtcaggaccagttcagctgtccagtctgtctggat
ctgctgaaggatccagtgactgttccctgtggacacagtttctgtatggtgtgtattaat
ggctgctgggatcagggtgatcagaggggggtctacagctgcccccagtgcagagagacc
ttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggacgaagtg
aagaagaaactccaaactgctcctcctgctcactgttacgctggacctggagatgtggag
tgtgatttctgcactgggagacaacataaagccaccaagtcctgtttggtgtgtcaggcc
tctttttgtgaaactcatcttaaacctcactataatgttcctggcttgaaaaaacacaag
ctggtcgaagcctccaaacagctaccagtgaagatctgctctgaacatgataaactgatc
gagatctactgtcatactgaccagcagtttgtatgttatttgtgtacgatggatgaacac
atgggccacgatacggttgcagttgtagcagaaagaaaagacaaacagaatcagctgaag
gagctgcagaggaaatctcagcagagactccaggagaaagagaagaagctgcaggaggtg
aaacaggctgtgaagactcttaagagctctgcacaggcagcagtggaggacagtgagagg
atctttactgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatc
agagctcaggaggaggctgaactgagtcgacctgaagaactcctggagcaactgcagcgg
gagtttgctgatctaaagaggagagacactgagctggagcagctttcacacacagaggat
cacatccatttcctccagagattccagtctctctgtgtctcttctgcatctgaggactca
cacagcctcactctccttcaacgtctctcatttgacggactgaggaaatctctctctgat
ctgaaagagaggctagaggaattctgcaaggaggaattcagtaacatatctttgtataat
gaaaggagctcttctgatgatgaacaaagtcttagcagtatgaagctaccaccagatatg
gctgtgcactcaaagctacagagcagagaagattttctgcagtatttctgtcggctgact
ctggatcccaacacagtaaatcagaacctcagtctatcggagaagaacaaagtggtgaca
tatggagggaaaaaccagtgttactctaatcatacagagagatttgactactggtatcag
gtgttgagtaaggagagtgtgagtggacgctgttactgggaggttgagtggagcagtgag
gtttggggatgtgtgtacatatcagtctcatataaaaggatcagcaggaaaggatggggt
gacgagtgcaggtttggacataacaatcagtcctggagtctgtgttgttctccttcctct
ctctctttctatcacaacaacattcagtctgagctctcagcctcatcatcctccagaata
ggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacaatg
accctcctacacacagtccacaccacattcagtcagcctctctatgctggatttatggta
aatttgagttctgtgaggttgtgtgatcgaaaatga
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