Colossoma macropomum (tambaqui): 118801136
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Entry
118801136 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118801136
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118801136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_10
zf-RING_5
Zn_ribbon_SprT
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
118801136
NCBI-ProteinID:
XP_036417194
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAEASISVDQDQFSCPVCLDLLKDPVTIHCGHSFCMVCINKHWNEEDQRRVYSCPQCRET
FTPRPVLRRNNMLAEVVEELKKKLQSAHHYAGPGDVECDFCTGRKLKAIKSCLVCLASYC
ETHLNPHYQSPAFKKHQLVEASTRLQERICSQHNEMIEIYCRTDQSCICYLCMMHEHKGH
DTVEAAAERTEKQSQLKEVQRKSQQRLQEKEKKLQEVKQAVVTLKSSAQAAVEDSERIFT
ELIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTEDHIH
FLQCFQSLCVSSGSEDSPSITVHQHLSFDGVRKSLSDLKERLEEFCKQEFSKTSPHAAAV
QMILPSESKTRDFLQYFCYLTLDPNTVNHQLSLSEQNRVVKWRGGEQSYSDHPERFDSWN
QVLCKESVSGRCYWEVEWRRWKSLLGWVSISVSYKGISREGRGNGSRFGFNNQSWSLFCS
STLSFWHNNIKTELSASSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYAGF
GIGLRSSVKLCD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcaggaccagttcagctgtccagtctgtctggat
ctgctgaaggatccagtgactattcactgtggacacagtttctgtatggtgtgtattaat
aaacactggaatgaagaagatcagaggagggtctacagctgcccccagtgcagagagacc
ttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggaggaactg
aagaagaaactccaatctgctcaccattacgctggacctggagatgtggagtgtgatttc
tgcactgggagaaaactcaaagccatcaagtcctgtttggtgtgtctggcgtcttactgt
gaaactcatcttaatcctcactatcagtctcctgcctttaagaagcatcagctggtcgaa
gcttctacacgactacaagaaagaatctgctcacaacacaatgaaatgatcgagatctac
tgccgtactgaccaaagctgcatctgttatttgtgtatgatgcatgaacacaaaggccac
gatacagttgaagccgcagcagagagaaccgagaaacagagtcagctgaaggaggttcag
aggaaatctcagcagagactccaggagaaagagaagaagctgcaggaggtgaaacaggct
gtggtcactcttaagagctctgcacaggcagcagtggaggacagtgagaggatctttact
gagctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcagagctcag
gaggaggctgaactgagtggagctgaggaactcctggagcaactggagcaggagattgct
gatctaaagaggagagacactgagctggagcagctttcacacacagaggatcacatccat
ttcctacagtgtttccagtctctctgtgtctcttctggatctgaggactcacccagcatc
actgtccatcaacatctctcatttgatggagtgaggaaatctctctctgatctgaaagag
agactagaggaattctgcaagcaggaattcagtaaaacctctccacatgctgcagcagtt
cagatgattttaccctcagagtcaaaaaccagagattttctacagtatttctgttatctg
actctggatcccaacacagtaaatcatcaactcagtctgtctgagcagaacagagtggtg
aagtggagaggaggagagcagagttactctgatcatccagagagatttgactcctggaat
caggtgttgtgtaaggagagtgtgagtggacgctgttactgggaggttgagtggagaaga
tggaagtcgctcttgggttgggtgtccatatcagtgtcatataaagggatcagcagggaa
ggacggggtaatgggtccaggtttggatttaacaatcagtcctggagtctgttctgttct
tctactctctctttctggcacaacaacattaagactgagctctcagcctcatcatcctcc
agaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acaatgaccctcctacacacagtccacaccacattcactcagcctctctatgctgggttt
ggaattggtctgagatcatcagttaaactgtgtgactga
DBGET
integrated database retrieval system
