Colossoma macropomum (tambaqui): 118801942
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Entry
118801942 CDS
T09004
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118801942
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118801942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
U-box
MAP65_ASE1
zf-RING_6
zf-Nse
eIF3_subunit
Dermcidin
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
118801942
NCBI-ProteinID:
XP_036418236
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDEASISVDQDQFSCAVCLDLLKDPVTTPCGHSYCMVCINGHWDQDDQRGVYSCPQCREA
FIPRPVLRRNNMLAEVVEKLKRPLQSVFYAGPGDVECDSCTGRKLKAIKSCLVCLASYCE
THLNPHYQSPAFKKHKLVEASKQLQEKICSQHHKLIEIYCRTDHSGICYLCMMYEHKGHD
TVAATAERSEMQNQLKETQRKSQQRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSERIFTE
LIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTEDHIHF
LQSLQSLCVSSGSEDSPSITVYQHLSFDGVRKSLSDLKERVEEFCKQEFSRISLYSERSS
ADEEYEGESLPAQSLCRRRDSMVSVRQPFPRLVFIRQTERIEREFLEIPHQMALHSELKS
REDFLQYFCWLTLDHNTVNCYLRLSEENRVVTFRQRPLLYSDHPERFDCWSQVLSKESVS
GRCYWEVEWSSSEGWLYISVSYKGISRKGGGNESWFGHNSQSWSLQCSPSLFFYHNNIQT
EISASSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYAGFWVNSGTVRLCDA
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccagtatttcagtagatcaggaccagttcagctgtgcagtctgtctggat
ctgctgaaggatccagtaacaactccctgtggacacagttattgtatggtgtgtattaat
ggacattgggatcaagatgatcagaggggggtctacagctgcccccagtgcagagaggct
ttcattccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaggccattacaatctgttttttacgctggacccggagatgtggagtgtgattcctgc
actgggagaaaactcaaagccatcaagtcctgtttggtgtgtctggcttcttattgtgag
actcatcttaatcctcactatcagtctcctgcctttaagaagcacaagctggtcgaagcc
tccaaacagctacaagagaagatctgctctcaacatcataaactgattgagatctactgt
cgcactgaccacagcggcatatgttatttatgtatgatgtatgaacataaaggtcatgat
acagttgcagctacagcagaacgatctgagatgcagaatcagctaaaagagacacagagg
aaatctcagcagagactccaggagaaagagaagaagctgcaggaggtgaaacaggctgtg
aagactcttaagagctctgcacaggcagcagtggaggacagtgagaggatctttactgag
ctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcagagctcaggag
gaggctgaactgagtggagctgaagaactcctggagcaactggagcaggagattgctgat
ctaaagaggagagacactgagctggagcagctttcacacacagaggatcacatccatttc
ctccagagtctccagtctctctgtgtctcttctggatctgaggactcacccagcatcact
gtctaccaacatctctcatttgatggagtgaggaaatctctctctgatctgaaagagaga
gtagaggaattctgcaagcaggaattcagtagaatctctctgtatagtgaaagaagctct
gctgatgaagaatatgagggtgaatctttacctgcacagagtctttgcaggcgtagagac
agtatggtcagtgtgcgtcagcccttccccagactggtgtttataagacagacagaaaga
atagaaagagaatttctggagataccacatcagatggctttacactcagagctaaagagc
agagaagattttctgcagtatttctgttggctgactctggatcacaacacagtgaattgt
tatctcagactgtctgaggagaacagagtggtgacattcagacagagaccactgctttac
tctgatcatccagagagatttgactgctggtctcaggtgttgagtaaggagagtgtgagt
ggacgctgttactgggaggttgagtggagcagtagtgagggatggctgtacatttcagtc
tcatataaagggatcagcaggaaaggagggggtaatgagagctggtttggacacaacagt
cagtcctggagtctgcagtgttctccctctctctttttctatcacaacaacattcagact
gagatctcagcctcatcctcctccagaataggagtgtatgtggatcacagtgcaggaact
ctgtccttctacagcgtctctgacacaatgaccctcctacacacagtccacaccacattc
actcagcctctctatgctggattctgggtgaactcaggaactgtgaggttgtgtgatgca
gaatga
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