Colossoma macropomum (tambaqui): 118801945
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Entry
118801945 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118801945
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118801945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Gp58
zf-RING_10
MAD
Fib_alpha
U-box
LMBR1
DUF4407
DUF4449
Dermcidin
Nup49_C
Y1_Tnp
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
118801945
NCBI-ProteinID:
XP_036418240
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MASISVDQDQFSCPVCLDLLKDPVAIPCGHSFCMVCINGCWDLEDQRGVYRCPQCRETFT
PRPDLRRNNMLAEVVEKLKKTELQAAPPAHCYAGPGDVECDSCTGRKLKAIKSCLVCLAS
YCETHLNPHYQSPAFKNHKLVKASKQLQEKICSQHDKLIEIYCRTDHSCICYLCTMHEHK
GHDTVAAAAERSQKQNQLKQELKKFQKRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSERI
FTELIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTEDH
IHFLQSFQSLCVSSGSKDSPSITVHQRLSFDGVRKSLSDLKERLEEFCKQEFSKISPQAA
AVQNLSPPAPKTRDDFLQYFCRLTLDPNTANDYLRLSEKNRAVTHIGIDQCYPDHLERFD
SWPQVLSKESVSGRCYWEVEWNSRGQELSISVSYKGISRKGEGNKCKFGHNSQSWSLQCS
PSLSFYHNNIQTKISASSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTEPLYAGF
WINGKFFVNGRTVRLCDPK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatttcagtagaccaggaccagttcagctgtccagtctgtctggatctgctg
aaggatccagtggctattccctgtggacacagtttctgtatggtgtgtattaatggctgc
tgggatcttgaggaccagaggggggtctacagatgtccccagtgcagagagaccttcact
ccaaggcctgatctacgcagaaacaacatgctggctgaagtggtggagaaactgaagaag
acagaactccaagctgctcctcctgctcactgttacgctggacctggagatgtggagtgt
gattcctgcactgggagaaaactcaaagccatcaagtcctgtttggtgtgtctggcttct
tactgtgaaactcatcttaatcctcactatcagtctcctgcctttaagaatcacaagctg
gtcaaagcctccaaacagctacaagagaagatctgctctcaacatgataaactgatcgag
atctactgtcgtactgaccacagctgcatctgttatttgtgtacgatgcatgaacataaa
ggtcatgataccgttgcagctgcagcagagagaagtcagaaacagaatcagctaaagcag
gagctgaagaaatttcagaagagactccaggagaaagagaagaagctgcaggaggtgaaa
caggctgtgaagactcttaagagctctgcacaggcagcagtggaggacagtgagaggatc
tttactgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcaga
gctcaggaggaggctgaactgagtggagctgaagaactcctggagcaactggagcaggag
attgctgatctaaagaggagagacactgagctggagcagctttcacacacagaggatcac
atccatttcctccagagtttccagtctctctgtgtctcttctggatctaaggactcaccc
agcatcactgtccatcaacgtctctcatttgatggagtgaggaaatctctctctgatctg
aaagagagactagaggaattctgcaagcaggaattcagtaaaatctctccacaggctgca
gcagttcagaatttatcacccccagcaccaaaaaccagagatgattttctacagtatttc
tgtcggctgactctggatcccaacacagcaaatgattatctcagactatctgagaagaac
agagctgtgacacacattgggatagaccagtgttaccctgatcatctagagagatttgac
agctggcctcaggtgctgagtaaggagagtgtgagtggacgctgttactgggaggttgag
tggaacagtagaggacaagagctgtccatatcagtctcatataaagggatcagcaggaaa
ggagagggtaataagtgtaagtttggacacaacagtcagtcctggagtctgcagtgttct
ccttctctctctttctatcacaacaacattcagactaagatctcagcctcatcatcctcc
agaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acaatgaccctcctacacacagtccacaccacattcactgagcctctctatgctggattt
tggattaatggcaagttttttgttaatgggagaactgtgaggttatgtgaccccaaataa
DBGET
integrated database retrieval system
