Colossoma macropomum (tambaqui): 118801947
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Entry
118801947 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118801947
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118801947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
Mt_ATP-synt_D
zf-RING_10
U-box
NOCA1_mid
TPR_TNPO3_IPO13_4th
ANCHR-like_BBOX
DUF745
Gp58
zf-Nse
CfpA_C
HrcA
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
118801947
NCBI-ProteinID:
XP_036418243
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAEASISVDQDQFSCPVCLNLLKDPVTTPCGHSFCMVCINGCWDLEDQRRVYRCPQCRET
FTPRPVLRRNNMLVEVVEILKKTELQAASLCYAGPGDVECDSCTGRKRKAIKSCLVCLTS
YCETHLNPHYQSPAFKKHKLVEASKQLQEKICPQHDKLIEIYCRTDHSCICYLCTMDEHI
GHVIVAAVAERKDKQNQLKEMQKKFQQRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSERI
FTELIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTEDH
IHFLQSLQSLCVSSGSEDSPSLTVHQHLSFDGVRKSLSDLKERLEEFCKQEFSKISTHVE
AVQMILPSEPKTREEFLQYFCRLTLDPNTVNKHLSLSEENRVVIYGGKVQRYSDHQERFD
RCNQVLSKESVSGRCYWEVEWSSEGWLYISVSYNGIGRKGRGCNCKSGHNSQSWSLQCSP
SLSFYHNNIQTELSASSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFSQPLYAGFW
VDGLLSAVGGTVRLCDPK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccagtatttcagtagatcaggaccagttcagctgtccagtctgtctgaat
ctgctgaaggatccagtgacgactccctgtggacacagtttctgtatggtgtgtattaat
ggctgctgggatctggaggaccagaggagggtctacagatgtccccagtgcagagagacc
ttcactccaaggcctgttctacgcagaaacaacatgctggttgaagtggtggagatactg
aagaagacagaactccaagctgcttctctctgttacgctggacctggagatgtggagtgt
gattcctgcactgggagaaaacgcaaagccatcaagtcctgtttggtgtgtctgacttct
tattgtgaaactcatcttaatcctcactatcagtctcctgcctttaagaagcacaagctg
gtcgaagcctccaaacagctacaagagaagatctgccctcaacatgataaactgatcgag
atctactgccgtactgaccacagctgcatctgttatttgtgtacgatggatgaacacata
ggacacgttatagtagcagctgtagcagaaagaaaagacaaacagaatcagctgaaggag
atgcagaagaaattccagcagagactccaggagaaagagaagaagctgcaggaggtgaaa
caggctgtgaagactcttaagagctctgcacaggcagcagtggaggacagtgagaggatc
tttactgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcaga
gctcaggaggaggctgaactgagtggagctgaagaactcctggagcaactggagcaggag
attgctgatctaaagaggagagacactgagctggagcagctttcacacacagaggatcac
atccatttcctccagagtctccagtctctctgtgtctcttctggatctgaggactcaccc
agcctcactgtccatcagcatctctcatttgatggagtgaggaaatctctctctgatctg
aaagagagactagaggaattctgcaagcaggaattcagtaaaatctctacacatgttgaa
gcagttcagatgattttaccctcagagccaaaaaccagagaagagtttctacagtatttc
tgtcgcctgactctggatcccaacacggtgaataaacacctcagtctgtctgaggagaac
agagtggtgatatatggtgggaaagtccagcgttactctgatcatcaagagagatttgat
cgctgcaatcaggtgttgagtaaggagagtgtgagtggacgctgttactgggaggttgag
tggagcagtgagggatggctgtacatttcagtctcatataacgggatcggcaggaaagga
cggggttgtaactgtaagtctggacacaacagtcagtcctggagtctgcagtgttctccc
tctctctctttctatcacaacaacattcagactgagctctcagcctcatcctcctccaga
ataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacaca
atgaccctcctacacacagtccacaccacattcagtcagcctctctatgctggattctgg
gttgatggtttacttagtgctgttggaggaactgtgaggttgtgtgatccaaaatga
DBGET
integrated database retrieval system
