Colossoma macropomum (tambaqui): 118803692
Help
Entry
118803692 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118803692
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118803692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Astro_capsid_N
zf-RING_10
MAP65_ASE1
Y1_Tnp
U-box
Dermcidin
Exonuc_VII_L
LMBR1
Motif
Other DBs
NCBI-GeneID:
118803692
NCBI-ProteinID:
XP_036420054
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAEASISVDQDQFSCPVCLDLLKDPVTIHCGHSFCMVCINGCWDQEDQRGVYSCPRCRET
FTPRPVLRRNNMMAEMLEKVKKTELQAAPPAHCYAGRGDVECDFCTGRKRKAIKSCLACM
VSFCGTHVQSHYQSPAFKKHKLVKASTRLQEKICSRHDKLLEIYCRTDQSCICCLCAMHE
HKGHETVVAAAERAKKQNQLKKVQKKSRQRLQQKEKKLRELKQTVVTLKRSAQAAVEDSE
RIFTELIRSIEKKRSEVTELIRTQEKNQLRQTEELLENLQQEIDDLKRRNTELEQLSVAE
DHIHFLQSFPSLSVSSGCEDSSSITVHQHPSFDGVRKSLSDLKERVEEFCKKEFSKIRPF
NLKKCEDHYAAAAVQPSLSSEPKTREDFLQYFCRLTLDPNTVYHKLVLSEKNRVVKWRGG
AERYSNHPERFDHWPQVLSKESVSGRCYWEVDWDNGGWGVSLSVSYKGISRKGAGNNCAF
GGNDISWSLLCCSVLSFWHNNIETKIPGSASSRIGVYVDHRAGTLSFYSVSDTMTLLHTV
RTTFTQPLYAGFWLKKGSFKLCDPDYVSGW
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtatttcagtagatcaggaccagttcagctgtccagtctgtctggat
ctgctgaaggatccagtgactattcactgtggacacagtttctgtatggtgtgtattaat
ggctgctgggatcaggaggatcagaggggggtctacagctgcccccggtgcagagagacc
ttcactccgaggcctgttctacgcagaaacaacatgatggctgaaatgttggagaaagtg
aagaagacagaactccaagctgctcctcctgctcactgttatgctggacgtggagatgtg
gagtgtgatttctgcactgggaggaaacgcaaagccatcaagtcctgtttggcctgcatg
gtttctttttgcggaactcacgttcagtctcactatcagtctcctgcgtttaagaagcac
aagctggtcaaagcctccacacgactacaggagaagatctgctctcgacacgacaaactg
ctggagatctactgccgtactgaccaaagctgcatctgttgtttgtgcgcgatgcatgaa
cacaaaggccacgagacagttgtagctgcagcagaaagagcaaagaagcagaatcagctg
aagaaggttcagaagaaatcccggcagagactccagcagaaagagaagaagctgcgggag
ctgaaacagactgtggtcactcttaagcgctctgcacaggcagcagtggaggacagtgag
aggatctttactgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctg
attagaactcaggagaagaaccagctgagacaaactgaagaactcctggagaacctgcag
caggagattgatgatctaaagaggagaaacactgagctggaacagctttcagtcgcagag
gatcacatccatttcctccagagtttcccgtctctgagtgtctcttctggatgtgaggac
tcctccagcatcactgtccatcaacatccctcatttgatggagtgaggaaatctctctct
gatctgaaagagagagtagaggaattctgcaagaaggaattcagtaaaataagacctttc
aacctaaagaagtgtgaagatcactatgctgctgcagcagttcagccgagtttatcctca
gagccaaaaaccagagaagattttctacagtatttctgtcgactgactctggatcccaac
acagtatatcataaactggttctgtctgagaagaacagagtggtgaagtggagaggagga
gcagagcgttactctaaccacccagagagatttgaccactggcctcaggtgttgtctaag
gagagtgtgagtggacgctgttactgggaggttgactgggacaatgggggatggggggtg
tctctatcagtgtcatataaagggatcagcaggaaaggagcgggtaacaattgtgcattt
ggaggcaacgacatatcctggagtctgttgtgttgttctgttctctctttctggcacaac
aacattgagactaagatcccaggctcagcatcctccagaataggagtgtatgtggatcac
agggcaggaactctgtccttctacagcgtctctgacacaatgaccctcctacacacagtc
cgcaccacattcactcagccgctctacgctgggttctggttgaagaagggaagtttcaag
ttatgtgatccagattatgtttctggttggtaa
DBGET
integrated database retrieval system
