Colossoma macropomum (tambaqui): 118803878
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Entry
118803878 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118803878
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118803878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Dermcidin
eIF3_subunit
MAP65_ASE1
DUF6504
Motif
Other DBs
NCBI-GeneID:
118803878
NCBI-ProteinID:
XP_036420311
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MAEASISVDQDQFSCPVCLALLKDPVAIPCGHSFCMVCINGCWDQGDQRGVYSCPQCRET
FTPRPVLRRNNMLAEVVEKLKKTELQAAPPAHCYAGPGDVECDFCTGRKRKAIKSCLVCL
ASYCETHLKPHYQSPAFKKHKLVEASKQLQEKICPQHDKVIEIFCRTDQSCICYLCTKYE
HKGHDTVAAAAERSEKQNQLKEMQRKSQQRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSE
RIFTELIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTE
DHIHFLQSFQSLCVSSGSEDSPSITVHQHLSFDGVRKSLSDLKERLEEFCKQEFSKISTH
VSAVQMILPPEPKIKDFLQYFCRLTLDPNTVNQYLILSEENRVVTNTGIYQLYFDHPERF
DCWYQVLSKESVSGRCYWEVEWSSSRIWELYISVSYKGISRKGGGNESWFGHNSQSWSLR
CSPSLSFYHNNIQTKISASSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYA
GFWVHGRIGVSGGTVRLCDPK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccagtatttcagtagatcaggaccagttcagctgtccagtctgtctggct
ctgctgaaggatccagtggctattccctgtggacacagtttctgtatggtgtgtattaat
ggctgttgggatcagggtgatcagaggggggtctacagctgcccccagtgcagagagacc
ttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagacagaactccaagctgctcctcctgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcactgggagaaaacgcaaagccatcaagtcctgtttggtgtgtctg
gcttcttattgtgaaactcatcttaaacctcactatcagtctcctgcctttaagaagcac
aagctggtcgaagcctccaaacagctacaagagaagatctgccctcaacatgataaagta
atcgagatcttctgtcgtactgaccaaagctgcatctgttatttgtgtacgaagtatgaa
cacaaaggtcatgatacagttgcagctgcagcagaacggtctgagaaacagaatcagctg
aaggaaatgcagaggaaatctcagcagagactccaggagaaagagaagaagctgcaggag
gtcaaacaggctgtgaagactcttaagagctctgcacaggcagcagtggaggacagtgag
aggatctttactgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctg
atcagagctcaggaggaggctgaactgagtggagctgaagaactcctggagcaactggag
caggagattgcggatctaaagaggagagacactgagctggagcagctttcacacacagag
gatcacatccatttcctccagagtttccagtctctctgtgtctcttctggatctgaggac
tcacccagcatcactgtccatcagcatctctcatttgatggagtgaggaaatctctctct
gatctgaaagagagactagaggaattctgcaagcaggagttcagtaaaatctctacacat
gtttcagcagttcagatgattttacccccagagccaaaaatcaaagatttcctacagtat
ttctgtcgtctgactctggatcccaacacggtgaatcagtacctcattctgtctgaggag
aacagagtggtgacaaacactgggatatatcagctttactttgatcatccagagagattt
gactgctggtatcaggtgttgagtaaggagagtgtgagtggacgctgttactgggaggtt
gagtggagcagtagtagaatatgggagctgtacatatcagtctcatataaagggatcagc
aggaaaggagggggaaatgagagctggtttggacacaacagtcagtcctggagtctgcgg
tgttctccctctctctctttctatcacaacaacattcagactaagatctcagcctcatca
tcctccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgacacaatgaccctcctacacacagtccacactacattcactcagcctctctatgct
ggattctgggttcatggtaggattggggttagtggtggaactgtgaggctgtgtgatcca
aaatga
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integrated database retrieval system
