Colossoma macropomum (tambaqui): 118808709
Help
Entry
118808709 CDS
T09004
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118808709 (chd6)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118808709 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
BRK
Chromo
ResIII
CHDCT2
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
118808709
NCBI-ProteinID:
XP_036427480
LinkDB
All DBs
Position
Unknown
AA seq
2921 aa
AA seq
DB search
MKIQKKDKQMSATHILKHTQAAAAPTASDQNAQTTFPIGHFGKEQIRIIGGPANHCMAHA
SSPSPHPSSSPVNSEEDDGGGGARVRKKRKKKDKKDSRDWQQEERESDIRPKKKKEQKEG
KELLQKKPRQPKEVKEAKKKEGKPVKEAKKVKKDQEVKSKTQAKSTTSLPRQRGRKPKEP
GAVPPEKRKKGKRKNEALQEAESDDTASLCTLATGGEESTDPMDSTKRRSGRQVKRRKYN
EDLDFKVVDDDGETIAVLGTGRIPAISSSTLAWQAEEPPEDDANIIEKILSVRTVKKETS
PGEPPEELEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKQAQMKHIFTEPDE
DLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPVKIREFE
ELKKIPEHKHVERPLPEQWQKLEKSREYRNGNQLREYQLEGMNWLLFNWYNRKNCILADE
MGLGKTIQSITFLYEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEINVIVYHGSQISRQ
MILQYEMYHRDEQGNIVPGHFKFHGVITTFEMIMADCPELKKINWRCVVIDEAHRLKNRN
CKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPMQFPSESTFLEEFGDLKTEEQ
VKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLAKGAN
QHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKTHNPDAPDFQLQAMIQAAGKLVL
IDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK
VDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL
ITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRKGAYGALMDE
EDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFISSGNRTDISLDDPNFWQKWA
KIAELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRSRRFGD
RSRRYLRAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEVLCRALLAYCVRHYKG
DDKIKSFIWDLITPTKDGHNQALQNHSGLSAPVPRGRKGKKMKNQLSPPELKNADWLVHC
NPEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAATQALEGVPASKLEVALPDI
DYIEIPTSWWDADADKSLLIGVHKHGYERYNAMRADPQLCFLERVGMPDVTALTAEQAGA
EGVTDAPDSVSKSDDIKEDVDAKPDDIEDKEEKEERKEEGSPYAEETQKHDNAVGDSLPD
GQTQEVVEQGRALWPAGSALTARLRRLITAYQRYTRREPLRHEFLMHEGIGPVAWQLGEE
IRRCTTDPDPLFLEWQRRWTRREQADFYRTVSSFGVVYDPDKKVFDWSQFRVFARLERKT
DESLERYFWSFVSMCRTACRLPPRKDEGPVDPTIFVEPVTEERAARTLYRIELLRKVREQ
VLRHPLLGERLKLCRPSLYLPVWWECGKHDRDLLIGVAKHGLSRTDFYILNDTQLSFLDA
HRNYVHKENYGYPVSGLPHQHCCLYDTNLGHCHSPQPPEYHPPTLHPSQAQHHMHAHGPS
EAAAASEPGSTREGFLDCPPLDDSLELGSLQHEGLASDSLHSKSGKEAFNGFPFNSASAG
QSMLNSYGVQGELSGAQGDMADSIAGKLRSDVLVGEQGSSEETGLMAPSVELNDLQTPWE
SSDHAEPSDIFNEADPILGAPALETGFLDPSQNEDGQERDDPLTDCLSMPSSDSQSNPVE
PLAPSFMLFKEIGETSVEQPDLSASPPEYVPPQPLALSDVSMDQAEPMSEELEEKLNDSD
ITHSDPSPEGGVEHVEYQFEKEDPSQASDSPLTKEDLSSAEPSVEPLKSECKVPFEDSSE
EQLKDPCEVSLVEPCEKLLMESGKVSLEEPYSMPCKEALGESFDGSSPQDPSEEHMEKDS
SEEPGKEPLEPMVDSTPDDTTLSAEEPLPPSFPLSPTLSSTAPDSHTFPDAEVVTHIKQE
FLLGPGVAEVKPEPDSTTLTPHLDQTAALEVKDEIKEEEAKSPALLGDGFVDAPRFAPPG
CEVADNLHDVREPTIAQLLQEKALYSFSEWPKDRVIINRIDSICHAILKGKWPSSSQQYE
STSSVANTCTANSAQQRAGFLPARMPLPQSLNFNIPHSVPRIQKERLVTPTFLPELKRPR
RGFEFEAEVLAKSSHLGEKIQVGVSHRGGALLLNGWQEAAMDLSKPTELAVAGETGPMSH
MTHTVQSAPHKIPGLSSMGLDMAGILQAGLIHPVTGQIVNGSLRRDDSIMRRRRGRRRNV
EDSDLGFLKGQGIHLPEQQGRPEGMNHAIVSSTSSQPERATATPSAPPPTEPLTTSVDRE
AASKSLMEWLRQNPSYSMELPAFPLSQTAGIMHGFVERPKQRRHRCKDPTKLDVNSLTGE
ERVPVVHRSTGRRLGGAMAPAIKELSQWLDANSEYSVAPDWADVVKHSGFLPEGKFTRIL
TEPVNRDSGARRRGRRPRSEMPKAPELPAGMGPLFMNGGLIGSMDLVSLPNLRNVPGIPI
TGLMGFPHGFAAAVPGEDTKNSLGMLPMMLHSMPAVQPPMYSAHVSRMMNQPPSTAASTT
SAAASSSSTATVTSTSSVPVALTPSPVDSSSAAAPLERASPESSTDRRSADERPQGEDER
NAATVAAPAATSSSASITSTGSHLAFNPFLIPGMSHGLLYPHMFLPHGSIMALPAMPAAD
STNSPKRKRKKAKDDGGAEGSGGGTQVEAGETKGLRSEQTAESKRLEEVLPAVETTEVGG
HSSCDPPAEVKSTDNEKEREGEGVTGRSASAAEEKGSEDVL
NT seq
8766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacaaaagaaggacaagcagatgtctgccacccacattttaaagcacacgcaa
gccgctgcagcaccaactgcctccgaccaaaacgcacaaactacatttcccatcggccat
ttcggcaaggaacagatccgcatcatcggcgggccggccaatcactgcatggcgcacgcc
agcagcccgagtccgcacccgtcgtcctcgccggtcaacagcgaggaggatgacggaggg
ggcggggccagggtgaggaaaaaacgaaagaaaaaagacaagaaagactcaagagactgg
cagcaggaggagagagagagcgacatcagaccaaagaaaaagaaggagcagaaagaaggg
aaggagctgcttcagaagaagcccaggcaacccaaggaggtgaaggaggccaagaagaaa
gaagggaagccggtaaaggaggccaaaaaggtcaagaaggatcaagaggtcaagtcaaag
acgcaggccaagtctacgacctcactgccgagacaacgaggcaggaagccaaaagagccg
ggcgccgtccctccggagaagaggaagaaagggaagcggaaaaacgaggccctgcaggag
gcggagagcgatgacacggcctcgctctgcacgctggccacgggaggagaggagagcacc
gaccccatggacagcactaagagacgttcggggcgtcaggtgaagcgcaggaagtataac
gaagatctcgactttaaggtggttgatgatgacggcgagaccatcgcagtgttgggaacg
ggacgaatccctgccatctcctcctccacgctcgcctggcaggccgaggaaccccctgaa
gatgatgccaacatcattgagaagattctctctgtgcgcaccgtcaagaaagagacatcc
cctggggagccccctgaagagctggaggagttttatgtcaagtacagaaatttctcctac
ctccactgtaaatgggcgactttggaggagctggagaaggacccacgcattcaccaaaaa
atcaagcgcttcaggaacaagcaggcacaaatgaagcacattttcactgagccggatgaa
gacctcttcaatcctgactacattgaagtagatcgagttctggagattgcgatcactaca
gacacagagacaggagaggaggtgacacactacctggtaaagtggtgttctctgtcttat
gaggaaagcacttgggaactgcaggaggatgtagaccctgtgaagatccgtgagtttgaa
gaactcaagaaaattccagaacacaaacatgttgagaggcctttaccagagcagtggcag
aagctggagaaatctcgagaatacagaaacggcaaccagctcagagaataccagcttgag
ggcatgaactggctccttttcaactggtacaacaggaagaactgcatcctcgctgatgag
atgggcttagggaagaccatccagtccataacattcctctatgagattttcctcatgggt
ttgagaggcccgttcctcatcatcgctccgctctccaccatcaccaactgggagagggag
ttccgcacctggaccgagatcaacgtcatcgtctatcacggcagccagatcagccggcag
atgatcctgcagtatgagatgtaccacagggatgaacagggaaacatagtgcctggtcat
tttaagttccatggcgtgatcaccacgtttgagatgatcatggctgactgccctgagctg
aagaagattaactggcgctgtgtggtgatcgacgaggctcatcggctgaagaaccggaat
tgtaaactgctggagggactcaaactaatgaacctggaacataaagttctcctaacaggt
acacctctgcagaactctgtggaggaactcttcagtctgctcaacttcctggagccgatg
cagtttccttcagagagcacgttcctcgaggagtttggggatttgaagactgaggagcag
gtcaagaagctccaggccattctgaagcccatgatgctgaggagactaaaagatgatgtg
gagaagaatctggcacccaaagaagagaccatcattgaggtggagctcaccaacatccag
aagaaatactaccgagccatcttggagaaaaacttcgcctttctggccaaaggagccaac
cagcacaacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgcaaccac
ccatacctcatcacgggtgctgaggagaagattctggagagcttcaggaaaacccacaat
cccgacgccccagatttccagctccaggctatgatccaagctgctgggaaactggtgctg
atcgacaagctgctgcccaaactgatcgccggaggacacaaggtgctgatattctcccag
atggttcggtgcttagacatattagaggactacctcattcagaggaggtacacctatgag
cgaattgatgggagagtccgagggaacctgcgtcaagcggccattgatcggttctgtaaa
gtggactctgaccgcttcgtgttcctgctgtgcacccgagccggcgggctgggcatcaac
ctcaccgctgcagacacctgcatcatcttcgactcggactggaaccctcagaatgacctg
caggctcaagcccgctgtcatcggatcggccagagcaaagcagtgaaggtgtatcgtctc
atcacgcgcaactcatacgaaagggagatgttcgacaaagccagtctaaaactgggactg
gacaaggctgttctgcaggacatcaaccgcaagggcagcctcaatggggttcagcagctg
tctaagatggaagtggaggatctcctgaggaagggcgcgtatggtgctctaatggacgag
gaagatgaagggtcgaagttctgtgaggaagatatcgaccagattctccaacgccgcacc
caaaccatcaccatccagtccgaggggaaggggtccacgttcgcgaaggccagttttata
tcttctggaaaccgaacggacatctctctggacgaccccaacttctggcagaaatgggct
aaaatcgctgagctggagatcgactcgaaagcagagaaggagagtctggtgatcgatacg
cctcgtgtgaggaagcaaacgcgccactacaactcgtttgaggacgacgagctgatggag
ttctcggagctggacagtgactccgaggagcgtccctgccgctcgcgccgcttcggcgac
cgcagtagacgatatctcagagcggagtgcttcagggtggagaagaacctcctcatattt
gggtgggggcggtggaaggacattctgaatcacggacgttttaagtggcacctcacagag
agagacatggaggtgctgtgcagagcgctgctcgcctactgcgtgcgccattacaaagga
gacgacaagatcaagagcttcatctgggacctaatcacgcccaccaaggacggacacaac
caagcactacagaaccactcggggctgtcggctcctgtgccgcggggccgtaagggtaag
aagatgaagaaccagttgagtcctccagagctgaagaatgcagactggctggtccactgt
aacccggaggtggtgctgcaggatgacagctacaagaaacacctcaaacagcactgtaac
aaggtgctgctgagggtgcggatgctgtattacctgaaggcagaggtgctcggtgaggct
gccactcaggctctggaaggagttccagccagtaaactggaggtggccctgccggatatt
gactacattgaaatccccactagttggtgggatgcagacgcagataaatctctgctcatc
ggagttcacaaacacgggtatgagcggtacaacgctatgcgtgcagaccctcagctctgt
ttcctggagcgagtgggcatgccagacgtcacagcacttacagcagagcaggctggggct
gagggggtgactgatgcacctgacagtgtgagtaagagtgatgatataaaagaagatgtg
gatgcaaagccagatgacatagaggacaaagaagagaaagaggagagaaaggaggaggga
agcccttacgcagaggaaacacagaaacatgacaatgctgtgggagactctcttccagat
ggacagactcaggaggtggtggagcagggacgcgctttatggccggcgggctccgccctc
acggccagattacggcgacttatcaccgcctatcagcgctacacgcgccgcgagccgctc
cgtcacgagttcctcatgcacgaggggattgggcctgttgcctggcaactgggcgaggag
atacggcgctgcacgactgatcctgatccgctctttctggagtggcagaggaggtggaca
cggcgtgagcaagctgacttctaccgtaccgtttcctccttcggggtggtgtacgacccg
gacaagaaggtcttcgactggagccagttccgtgtctttgcacgtttggagagaaaaaca
gacgaaagcttggagagatatttctggagcttcgtctctatgtgccgtacggcctgcaga
ctgccgccaaggaaggatgaaggccctgttgaccccactatatttgtggaacccgttact
gaagaacgagctgctcgcactttgtaccgcattgagctcctgcggaaggtccgtgagcag
gtcttgcgtcacccccttctgggggagcgtctgaagctttgccgtcctagcctttacctg
cctgtttggtgggagtgtggcaaacatgaccgggaccttctcatcggagtggccaagcat
ggcctcagccgcactgacttctacattctcaatgatacgcagctgtcgttcctggacgct
catcgcaattatgtccacaaagaaaactatgggtacccggtatcaggccttccacatcag
cactgctgcctgtacgacaccaatttgggacactgccattcccctcagcctccggaatac
catcctccaactttgcacccctcacaagcacagcaccacatgcatgctcatggaccctct
gaagccgcggcagcatcagagcctggaagcaccagggaaggcttcttggattgcccgcca
ttggacgactcgttggaacttgggtccttacagcatgaaggcttggcctcagactcgctc
cacagcaaatctggcaaagaggccttcaacggattcccatttaattcagcttctgccggg
cagagtatgctaaattcatacggtgtacaaggagagctaagcggggcgcaaggagacatg
gctgactccatcgctggaaagcttcgtagtgacgttttggttggagagcagggttcctcg
gaggagacaggcttaatggctccctcggtggagttgaatgatctacagacaccgtgggag
agctcagaccatgctgaaccatctgatattttcaatgaggctgatcccatcttgggcgcg
cctgcattggaaacaggattcctggacccttcacaaaatgaagatggacaggaacgggac
gatcctctcacagactgcttgagcatgcccagttcggactcgcaaagcaacccggtagaa
ccgctagcgccaagctttatgttgtttaaggagattggagagacgtccgtggaacaaccg
gatttatctgcaagtcctccggaatatgttcccccacaacctcttgcgctttcagatgtg
agcatggaccaagcggagccgatgagcgaggagctagaagagaagctgaatgattctgac
atcacgcacagtgaccccagtccagaaggtggagtagaacatgtggaatatcagtttgag
aaagaggatccatcccaagctagtgatagtcctttgacaaaggaagacttgtcttctgca
gaaccttcagtggagcccctaaaatcagagtgcaaggtaccatttgaggattcaagtgag
gagcagttgaaggatccttgtgaagtgtccttggtagaaccttgtgagaaactcctaatg
gagtcaggtaaagtgtccttagaagaaccgtacagtatgccctgcaaagaggccctaggg
gaatcatttgatgggtcttctccccaagaccccagtgaggaacacatggagaaagattcc
tctgaagagcctgggaaagaacccctagaaccaatggtggacagtacgccagatgacacc
actctgtcagcagaggagcctttgccgccatcgtttcctttatctcccactctttccagc
acagcaccagacagccacacattcccagatgctgaggtggtcactcacataaaacaggag
ttcctcctgggtccaggagttgccgaggtcaagcctgagcctgacagcactacattgacc
cctcacctggaccagactgctgctctggaagtgaaggatgagataaaggaagaagaagca
aaaagtccagctctgctgggagatggttttgttgatgcgccgcggtttgctccaccagga
tgtgaggtggcagacaatctccatgatgtaagagagccaaccatcgctcagctcctgcag
gagaaagctctgtactccttctctgaatggcctaaggacagagtgatcatcaaccgcatc
gacagtatatgccatgccatcttaaaggggaaatggccttcctcgagtcagcagtacgag
tctaccagctcagtggccaacacctgcacggccaacagtgcccagcagagagcagggttt
ctgcctgccagaatgcctctacctcagagccttaacttcaacatcccacactcagtcccc
cgaatacagaaggagcgcttggtgacccctacgttccttcctgaactcaagcgtcccagg
cgaggcttcgagttcgaggcggaggttctcgccaaatcgagccatcttggagaaaaaatc
caagttggcgtctctcaccgtggaggcgctctcctcctcaacggatggcaagaagcggcc
atggacctgtccaagccaacagagcttgcagttgctggggagactggcccaatgagtcac
atgacccatactgtccagtcagcacctcataagattcccggcctgagctcgatgggactg
gacatggctggcattctgcaagcaggccttatacaccctgttacagggcagattgttaac
ggtagccttcgtcgtgatgactcgataatgaggagaaggagaggccggagaagaaacgtg
gaagactctgacctgggattcctgaagggacaaggcatccatttacctgagcaacaggga
cgaccagaggggatgaaccatgccatcgtgtcctccacctcctctcagccagaacgcgcc
acagctaccccttcagctcctcctcccacagagccactgaccacaagtgtggacagagag
gcagccagtaaaagtctgatggagtggctcagacagaaccccagctacagcatggagctt
cctgcttttccactgtctcagactgcaggcataatgcacggttttgttgaacgtccaaaa
cagaggaggcatcgctgtaaagaccccaccaagttggacgtgaactccctgaccggagag
gagagagtgcctgtagtgcacaggagcacagggcgcaggctgggtggcgctatggcccca
gcaattaaggagctctcccagtggctggatgcaaactctgaatattccgtagctcctgac
tgggcagacgtagtgaagcattcaggtttcctcccggaaggaaagttcacccgtatcctc
actgaaccggtgaaccgggactccggcgcacgtcggcgaggcaggcgaccccgcagcgag
atgcccaaagcccccgagctgccagctggcatgggaccactctttatgaacggtgggctc
attggtagcatggacctggtcagcttacccaacctccgcaatgtccccggcatcccgata
accggtctcatgggcttccctcatggtttcgctgctgctgtccctggagaagacactaag
aacagtctgggcatgctacccatgatgctccacagcatgccggcagtgcagccgcctatg
tacagcgctcatgtgagcaggatgatgaaccagccgccgtccacggcagcctccaccacg
tccgcggctgccagctcctccagcacggcgacagtgacctccacgtcctccgtccctgtg
gccttaaccccaagcccggtagacagctccagcgcagcggcccccctcgagagggccagc
cccgagtctagtactgacagacggagcgcggacgaaaggccgcaaggcgaggacgagagg
aacgcggcgactgtcgccgcccctgcggccactagcagcagtgctagcattacgagcact
gggagccatttggccttcaaccccttcttgatcccaggaatgtcccacggactgctgtat
ccgcacatgttcctgccgcacggcagcattatggcacttccggccatgccggcagcagat
agcaccaacagccccaagcgaaagagaaagaaagcgaaggatgacggaggggcggaagga
agcggtggtggcacgcaggtggaagctggggagacaaaggggttgaggagtgaacagaca
gcggagagcaagaggctggaggaagttctgccagccgtggagaccactgaggttggaggt
cacagctcctgtgaccctccagctgaggtcaagagcactgacaatgagaaagaaagggaa
ggagagggagtgacggggcgtagcgcctctgcggcggaagaaaaaggctcggaggacgtg
ctgtag
DBGET
integrated database retrieval system
