Colossoma macropomum (tambaqui): 118809330
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Entry
118809330 CDS
T09004
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118809330 (rbfox3a)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118809330 (rbfox3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
118809330
NCBI-ProteinID:
XP_036428414
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
METPSWAETKPGNGLCKSGSIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQEAPAPPEAM
AQPYAPAQYPPPPPQNGLPGEYAHPGQEYTGPSPVPEHAAALTIYTPTQTHSEPPGTDSS
TPSLTGTSSIPQADEVAQTEGSQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFG
QFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTN
KKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYNTFRA
APPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATADPYHH
TIGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgagctgggcagaaaccaaaccaggaaacgggctgtgcaaatccggaagc
attgctctctttggaaacgtagtttacagtgggctgctgaacgatcacttctggcatttt
ggggttcccctcgtcacaagactgggtaaccaggaggccccagctcctccagaggccatg
gctcagccgtatgctccagcgcagtacccccctccaccgccccagaacgggctgccgggc
gagtatgcccacccggggcaggagtacacagggcccagcccggtgccggagcacgcggct
gccctcaccatctacacacccacacagacacacagcgagccgcccggcaccgacagcagc
acaccctccctcacagggaccagcagcataccacaggcggacgaggtggcgcagacggag
ggctcccagcagctccagctccagccttcagactcgtcggagaagcagcagcccaagcgg
ttgcatgtctctaatattcccttccgcttccgtgatccagacctgcggcaaatgttcggg
caatttgggaaaattttagatgtggaaattatttttaacgagcggggctctaagggtttt
ggttttgtaacttttgaaacgagtgcagatgcggatcgcgcacgggagaaactaaatggt
acaatcgtagagggacgcaaaatcgaggtaaataatgcaacagcaagagtaatgacaaac
aaaaaagtggctaatccctacacaaatggctggaagctgaacccagtggtgggagctgtc
tatggtcctgaattttatgcagtcacgggcttcccgtacccaaccacaggggccacagtg
gcgtataggggtgcccacttgaggggccggggtcgtgcggtttacaacacgttccgtgct
gctcctccgcctcctccaattcccgcttatggagctgtggtttaccaggatggtttctac
ggtgctgagatctacggcggctatgcagcgtacaggtatgcccagccagccgcagcagcc
gcagcagcttacagtgacagttatggcagagtctatgcaacagcagacccctaccaccac
acgattggacctgcagccacgtacagcgtgggcactatggctagcctatacagaggaggg
tacagtcgcttcactccctactaa
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