Colossoma macropomum (tambaqui): 118814488
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Entry
118814488 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118814488
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118814488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
LMP
zf-RING_5
Fib_alpha
zf-RING_10
Exonuc_VII_L
U-box
GldM_1st
LMBR1
Zn_ribbon_SprT
DUF4358
Senescence
DUF445
WASH_WAHD
zf-RING_6
MRP-S31
PIN_8
ALMT
DUF4407
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
118814488
NCBI-ProteinID:
XP_036436010
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MASISVDHDQFSCPVCLDLLEDPVTINCGHSYCKVCINGCWDQEDQRGVYSCPQCRQTFT
PRPVLRRNNMLAEVVEKLKKTELRAAPPAPRYAGPGDVECDFCTGRKLKAIKSCLTCLAS
FCETHLKPHCEVPALKRHKLVKASSQLQEKICSQHDRLIEIYCRTDQSYICYLCAMVEHR
GHDTVSAVTERTEKQLKKIQRKFQQRIQEKQKKLQELKQTVKTIKRCAQSAVEDSERIFT
ELIRSIEKKRSEVTELIRAQEEAELSGAEELLEKLEQEIADLKRRHTELEQLSHTEDDIH
FLQSFQSLCVSFGSEDSPSITVHQHLSFDGVRRSLSKLKERLEEFCREEFSKIPPHAAAV
QILSSEPKTREDFLQYFCQLTLDPNTVYCRLRLSEKNRVVTYSNYVQSYSDHPERFDYWR
QVLCKESVSGRCYWEVQWSSGGWFVYISVSYKGNSRKGRGIGCGFGHNSQSWSLQCSSSL
TFWHNNIQTKISGPSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYAGFYVC
GAGSSVRLCDK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatttcagtagatcatgaccagttcagctgtccagtctgtctggatctgctg
gaggatccagtgaccatcaactgtggacacagttactgtaaggtgtgtattaatggctgc
tgggatcaggaggatcagaggggggtctacagctgcccccagtgcagacagactttcact
ccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactgaagaag
acagaactccgagctgctcctcctgctccccgttacgctggacctggagatgtggagtgt
gatttctgcactgggagaaaactcaaagccattaagtcctgtctgacgtgtctggcctcc
ttttgtgaaactcatcttaaacctcactgtgaagttcctgcattgaaaaggcacaagctg
gtcaaagcctcctcacagctacaggagaagatctgctctcagcacgacagactgatcgag
atctactgtcgtactgaccaaagctacatctgctatttgtgtgcaatggtggaacacaga
ggccacgatacagtctcagctgtaactgagagaaccgagaaacagctgaagaagattcag
aggaaattccaacagagaatccaggagaaacagaagaagctgcaggagctgaaacagact
gtgaagactattaagcgctgtgctcagtcagcagtggaggacagtgagaggatctttact
gaactgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcagagctcag
gaggaggctgaactgagtggagctgaagaactcctggagaaactggagcaggagatcgct
gatctaaagaggagacacactgagctggagcagctttcacacacagaggatgacatccat
ttcctccagagtttccagtctctctgtgtctcttttggatctgaggactcacccagcatc
actgtccatcaacacctctcatttgatggagtgaggagatctctctctaagctgaaggag
cggctagaggagttctgcagagaggagttcagtaaaatccctccacatgctgcagcagtt
cagattttatcctcagaaccaaaaaccagagaagattttctgcagtatttctgtcagctg
actctggatcccaacacagtgtattgtcgcctcaggctgtctgagaagaacagagtggtg
acatacagtaattatgtccagtcatactctgaccatccagagagatttgactactggcgt
caggtgttgtgtaaggagagtgtgagtggacgctgttactgggaggttcagtggagcagt
ggaggatggtttgtgtacatatcagtctcatataaagggaacagcaggaaaggacggggt
attggttgtgggtttggacacaacagtcagtcctggagtctgcagtgttcttcgtctctc
actttctggcacaacaacattcagactaagatctcaggaccatcatcctccagaatagga
gtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacaatgacc
ctcctacacacagtccacaccacattcactcagccgctctacgctgggttctatgtttgt
ggtgctggatcatctgtgagattatgtgataaataa
DBGET
integrated database retrieval system