KEGG   Colossoma macropomum (tambaqui): 118814488
Entry
118814488         CDS       T09004                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118814488
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118814488
SSDB
Motif
Pfam: PRY zf-C3HC4_4 zf-RING_UBOX SPRY zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 LMP zf-RING_5 Fib_alpha zf-RING_10 Exonuc_VII_L U-box GldM_1st LMBR1 Zn_ribbon_SprT DUF4358 Senescence DUF445 WASH_WAHD zf-RING_6 MRP-S31 PIN_8 ALMT DUF4407 V_ATPase_I
Other DBs
NCBI-GeneID: 118814488
NCBI-ProteinID: XP_036436010
LinkDB
Position
Unknown
AA seq 551 aa
MASISVDHDQFSCPVCLDLLEDPVTINCGHSYCKVCINGCWDQEDQRGVYSCPQCRQTFT
PRPVLRRNNMLAEVVEKLKKTELRAAPPAPRYAGPGDVECDFCTGRKLKAIKSCLTCLAS
FCETHLKPHCEVPALKRHKLVKASSQLQEKICSQHDRLIEIYCRTDQSYICYLCAMVEHR
GHDTVSAVTERTEKQLKKIQRKFQQRIQEKQKKLQELKQTVKTIKRCAQSAVEDSERIFT
ELIRSIEKKRSEVTELIRAQEEAELSGAEELLEKLEQEIADLKRRHTELEQLSHTEDDIH
FLQSFQSLCVSFGSEDSPSITVHQHLSFDGVRRSLSKLKERLEEFCREEFSKIPPHAAAV
QILSSEPKTREDFLQYFCQLTLDPNTVYCRLRLSEKNRVVTYSNYVQSYSDHPERFDYWR
QVLCKESVSGRCYWEVQWSSGGWFVYISVSYKGNSRKGRGIGCGFGHNSQSWSLQCSSSL
TFWHNNIQTKISGPSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYAGFYVC
GAGSSVRLCDK
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggccagtatttcagtagatcatgaccagttcagctgtccagtctgtctggatctgctg
gaggatccagtgaccatcaactgtggacacagttactgtaaggtgtgtattaatggctgc
tgggatcaggaggatcagaggggggtctacagctgcccccagtgcagacagactttcact
ccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactgaagaag
acagaactccgagctgctcctcctgctccccgttacgctggacctggagatgtggagtgt
gatttctgcactgggagaaaactcaaagccattaagtcctgtctgacgtgtctggcctcc
ttttgtgaaactcatcttaaacctcactgtgaagttcctgcattgaaaaggcacaagctg
gtcaaagcctcctcacagctacaggagaagatctgctctcagcacgacagactgatcgag
atctactgtcgtactgaccaaagctacatctgctatttgtgtgcaatggtggaacacaga
ggccacgatacagtctcagctgtaactgagagaaccgagaaacagctgaagaagattcag
aggaaattccaacagagaatccaggagaaacagaagaagctgcaggagctgaaacagact
gtgaagactattaagcgctgtgctcagtcagcagtggaggacagtgagaggatctttact
gaactgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcagagctcag
gaggaggctgaactgagtggagctgaagaactcctggagaaactggagcaggagatcgct
gatctaaagaggagacacactgagctggagcagctttcacacacagaggatgacatccat
ttcctccagagtttccagtctctctgtgtctcttttggatctgaggactcacccagcatc
actgtccatcaacacctctcatttgatggagtgaggagatctctctctaagctgaaggag
cggctagaggagttctgcagagaggagttcagtaaaatccctccacatgctgcagcagtt
cagattttatcctcagaaccaaaaaccagagaagattttctgcagtatttctgtcagctg
actctggatcccaacacagtgtattgtcgcctcaggctgtctgagaagaacagagtggtg
acatacagtaattatgtccagtcatactctgaccatccagagagatttgactactggcgt
caggtgttgtgtaaggagagtgtgagtggacgctgttactgggaggttcagtggagcagt
ggaggatggtttgtgtacatatcagtctcatataaagggaacagcaggaaaggacggggt
attggttgtgggtttggacacaacagtcagtcctggagtctgcagtgttcttcgtctctc
actttctggcacaacaacattcagactaagatctcaggaccatcatcctccagaatagga
gtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacaatgacc
ctcctacacacagtccacaccacattcactcagccgctctacgctgggttctatgtttgt
ggtgctggatcatctgtgagattatgtgataaataa

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