Colossoma macropomum (tambaqui): 118814539
Help
Entry
118814539 CDS
T09004
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118814539
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118814539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
118814539
NCBI-ProteinID:
XP_036436070
LinkDB
All DBs
Position
Unknown
AA seq
2113 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYNFRGGGEYGPVISAPAQDDPVLRSF
TRCVQANLLCVWRRRVKPDAKELWIFWWGDEPNLSDIIHHELEVVEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKDFVRIGKWFVKPYELEEKLLSTSSSEHLSCSFSFFLHGESNVC
TSVEIAQHQPTYHITEEHVRLAQTSSSPIQVILSPYGLGGTLTGQAFKMSDPAVRKLMEE
WSHFYPMVLKRKEGEREEGDPTYDPHSHVALEVIVGGVRMIYPAAFVLIAQADLPVEQPP
PAQGAQSGTRDSSNCGIPLTPPTSPEQPCSGDSGFQTAVSSVTSHESGPVHSPKHSEKKL
TNQMVHQAWKECYVNQLQRKCNLSNSMTPKKEVSNGLPTWDFTDPGERAPCSCSRLRQQA
KQQQASSSCANAQPGANPSSCPTSSAPSLPPASAPKYKPADKPDKSDKAPKRVTVTPFHH
RLSVDQQQCSEQDAPASSQLALVPLDPPLDSLPSCKYPKPLPGIRKGPESLLHSPVSPLP
PTLSPHPRVQDPEAMEAPVGLPLCLEGPSVPPPPEMSETALYTASLVPRDAGGGWWKSYR
IPRVDKAEFKPLELTCDVVENKSESSSEGTTLKRLFAQTHKRFKISEERLREHISTLGFL
QQPGVEGLADPGDDPYDFKEGDIEYSFPTSKRLKGQGRDPNRKSKGEEMNSNNAVPEGKD
AMSIFSSAPKSEELAQDESGAKANPPLTREKDLIVLISDLENIFGEEEDELGTTFPNHQQ
STKTVVPGAEERPMGIDGRVAVPYPSTVAELQRMFPTPPSLEQHPAFSPIMTYRDTPSQE
PPAPSAGLEHPLSAHANSQLIDFKMEVEDGMTSPKAEDTRDFSFVYRVPSVQPQLGSSMF
APLRTLPSQCLPPLKIPEPCYYRPSWALLPKMEHYCLPNQAPFIRDGYVNVPSISTLQDQ
DYSQMSAGAASVGTVGGVLPSPATPRFSVPTPRTPRTPRGVGTASGQGSVKQDGTELSSP
ASTPSASLPLSSVEPVPCGPALPEAHSLYAILLLSDSVLDIFKDRNFDSCCICACNTNVK
GADVGVYIPDSTLEDQYRCMCGFSAIVNRRLAHGAGLFLEDELDIFGRGSEAGRAAERRL
ALCRREPSAGTRRGTQEPPIAVLGLIQEQCSQPISSLASLHKPAACSCRSRQGALLQSWA
ADRLWADSSDACVECYNALVQGLQYVDNAAGGKVEQALVRSTALHSWPQTNVLDISMLSS
QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPL
PIPTLLVGYDRDFMALSPLALPFWEKLLLEPYGGQRDVAYLVLCPDNDPILNGARAFFQE
LSAVYESCRLGKHRPLGRVSRDGIVHVGSEELEKLEEDMVDEWLTGPWAGQHQEDHLSKL
KLYAQTCKQKLVPQLSALSLDSSLLLPPKPQPSPAPSQTAQSASSSQPTPDADTAAVAPT
SGNTPISTPTGTSTGQTGSTEQGQSETKSVPNSALNPNQAAEGSENNSAERERIGIPTVA
ESADSHVHPPAIVLYMVDPFLCSGMGAGSGEDEEAEEVESSSVWLLSLLRCFTDMLSMLP
ESIQPAVVLQVVPCQYLLQPASGESPLYLQHLRSLAFSAHSQCRRRLPTQTQIKSLTGFG
PAATIDFLLKSPENPSSMQVYSPPFILGPTRSKLQEAGEVCSEAPARYNILFVGYCLSHD
QRWILVSCTDQQGELLETCIINIDVPNRSRRPKFSPRKIGLQKLWEWCIGIIQMTAVPWR
IVIGRLGRLGHGELKDWSLLLGEHSLHSISRQLREACRMCGISAADSPSILSACLVSMEP
QGSFVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSSTTQVAPSSYPTE
DNPDDMFGLPFPDELENDIGHDMMFFTGTLHPSPNTSPVPSPGSPSVMGVGSHFQHTRSQ
GERLLSREAPEELKQQPLALGYYVSTAQAEGLPHWFWASCPQAQNQCPLFLKASLHHHIS
IAQTDELVSSKTSQRSPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLV
ILIQMYNAILNIL
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcagcgaactgggtggctaacggggcgagccttgaagactgccattccaac
cttttctctctggcggaattgaccggcattaaatggcggtgttacaacttccgtggtggc
ggcgaatatgggccggtgatttcagcgcctgcgcaggacgacccggtgctgcgcagcttc
acgcgctgcgtgcaggccaacctgctgtgtgtgtggcgccgtcgtgtcaagcccgacgcc
aaagagttgtggatcttctggtggggcgatgagcccaacctgagtgacatcatacaccat
gagctggaagtggtggaagagggtctgtgggaatgtgggctctcctacgagtgcaggaca
ctcctcttcaaggccattcacaacttactggaaagatgcctaatggataaggactttgtg
cgaattggcaagtggttcgtcaagccttacgagctcgaagagaagcttctcagcaccagc
agcagtgagcacctctcctgctccttctccttcttcctgcacggtgagagtaacgtgtgc
accagcgtggagatcgctcagcaccagcccacctatcacatcactgaggagcatgtgcgc
ctggcccaaacctccagcagccccatacaggtgatcttgagtccatatggacttggtggc
actctgacgggacaggccttcaagatgagcgacccagcggtgcggaagctgatggaggag
tggagccacttctaccccatggtgctcaagcgcaaggagggcgagcgggaagagggtgac
cccacctacgatccccacagccatgtcgccctggaggtcattgttggtggagtgagaatg
atttacccagcagcctttgtactcatcgctcaggctgatctgccagtggagcagcctcct
cctgctcagggcgctcagagtggcaccagagactcctccaactgcggcatccccctcaca
ccccccacctcaccagagcagccctgctcaggtgatagtggctttcagaccgcagtctcc
agcgtcactagccatgagagcggccctgtccacagcccaaagcactcagagaagaagctg
accaatcagatggtccatcaggcctggaaagaatgctatgttaaccaattacagcgcaaa
tgcaatctgtccaacagcatgacgccgaagaaggaggtgtcaaacgggctgcccacttgg
gacttcactgaccctggggagagagccccctgcagctgctccaggttgaggcagcaggca
aagcagcagcaggcgagcagctcctgtgccaatgcacagcctggtgccaacccatcctcc
tgccccacctcctccgccccctccttacccccagcctccgcacccaaatacaagccagcc
gacaaacccgacaaatctgacaaggctcctaaacgggtgaccgtaacccctttccatcac
cgcctctccgtggaccagcagcagtgttcagagcaggacgccccagccagctcccagctg
gcccttgtgcccttggaccctccactggattccttgcccagctgcaagtaccccaaaccc
ctgccgggaatcaggaaaggccctgaatccctcctccattccccagtatcgccactgcca
cctacgctaagtccgcaccccagggtgcaggaccctgaggccatggaggccccggtgggc
ttgcccctctgcttggagggcccttcggtgcccccacctccggagatgagtgagacagcg
ctgtatactgcctctctggtgcctcgggatgctggcgggggctggtggaagagctacagg
attcccagggtagacaaggctgagttcaagcctctggaactgacctgtgatgtagtggag
aacaaatcggaaagcagcagtgaaggcaccacgttgaagaggctttttgcacagacacac
aagcggtttaagatctcagaggagcggctgcgggagcacatcagcaccttgggcttcctg
cagcaaccgggagtcgaggggctcgcagaccctggagatgacccgtatgacttcaaggag
ggggacattgagtacagcttccctacatccaaaagactgaagggccagggccgggatccg
aaccgtaaatcaaagggagaggagatgaacagcaacaatgcagtgcctgaaggaaaagat
gccatgtccatttttagctccgctcctaaatctgaagaactggctcaagatgagtctgga
gccaaggccaacccccctctaacaagggagaaggatctgatagtgctaatctctgacctc
gaaaatatctttggggaggaggaagatgaactcgggaccacttttccgaatcatcagcag
tcaaccaagactgtggtcccaggagcagaagagcgccctatggggattgatggaagagta
gcagtgccatatccctcaacagtagcagagcttcagcgaatgttccccactccgccttct
ttggagcagcacccagcattctcccccatcatgacgtaccgtgacacccccagccaagag
ccccctgccccctctgccggcctggaacaccccctcagtgcccacgccaacagtcagctc
atcgactttaagatggaggtggaggacggcatgaccagccccaaagcagaagacacacgg
gacttctcatttgtgtaccgtgtcccctccgtccagccacagttgggctcttcaatgttt
gcccctctgcggaccctgcccagccagtgcctgcccccgctgaagattcctgagccgtgc
tactacagaccttcctgggccctgctgcccaagatggagcactactgccttccgaaccaa
gccccgttcataagagacggatatgtcaacgtccccagcatcagcaccctacaggaccag
gactacagccaaatgagtgctggcgccgcctctgttggcacagtgggtggagtcctccct
tctccagccacgccacgcttctctgtccccacgcctcggacccctcgcactccccgtggc
gtgggcacagctagtgggcaaggttcggtcaagcaggatggcactgagctgagctctcct
gcttccacaccttcagccagcctgccactcagctccgtggagccagtgccatgtgggccg
gccttgccagaggcccacagcctctatgccatcctgctgctgtctgactccgtcctggac
atcttcaaggaccgcaactttgacagctgctgcatctgtgcatgcaacaccaacgtgaag
ggtgcagacgtgggtgtctacatcccggactccacacttgaggaccagtaccgctgcatg
tgtggtttcagtgccattgtcaaccgcagactagcgcatggtgctggcctcttcctggag
gacgagctggacatctttggccgcggctcggaggccggacgtgctgccgagaggaggctg
gcgctatgtaggagggagccgtcagccggcacaaggcgagggacgcaggagccacccata
gcagttttgggcctgattcaagaacagtgctcccagcccatctcctcattggcctcgcta
cataagcccgctgcttgctcttgccgtagcagacagggggcgctcttgcagagctgggcg
gctgaccggctgtgggcggacagcagtgatgcgtgcgtggagtgctataacgcgctggtg
caaggtcttcagtatgtggacaatgcggcagggggaaaggtggagcaggctttggtgagg
agcaccgccctacactcctggcctcagacgaatgtgttggacatcagcatgctctcctct
caggatgtggtgcggatgctgttgtccctgcagcccttcctgcaagatgccattcagaag
aagcgcactggtcggacttgggagaacatccagcacgttcagggaccactcacgtggcag
cagttccacaagatggctgggcgtggctcctatggttcggaggagtctcctgagcctctc
cccatccccacactgttggtgggctatgaccgagacttcatggcactgtcccctctggct
ctgcccttctgggagaaattgctcctggagccttatgggggtcagagggacgtggcatat
ttggttctttgtcctgataatgaccccatactcaacggagcaagagccttctttcaggaa
ctcagcgctgtttatgagtcatgtcggctagggaagcaccgtccgctgggtcgagtgtct
agagatggcatagtgcatgtggggtcagaggaactggagaagctggaagaggacatggtg
gacgagtggctcactggaccctgggctggacaacaccaggaagaccatctcagcaaactt
aagctctatgcccaaacctgcaaacagaagctagtgccacagctctcagccctgtcattg
gacagcagtctccttctgcccccaaagcctcagcccagtccagctcccagccaaactgcc
cagtctgcttcttccagccagcccacccctgacgcagatacagcagcagtagcccccact
tcaggaaacacacccatatccacacccacgggaaccagcacggggcagaccggctccact
gagcagggacagagcgagaccaaaagtgtccccaactccgcactgaacccaaaccaagca
gcagagggtagtgagaataactcagcagagcgagagcgaattggcattccaacagtggcg
gaatcagcggacagccatgtccaccctccggccattgtactgtacatggtggatcccttc
ctgtgttcgggaatgggtgctgggtcaggggaggatgaggaagcagaggaggtggagtcg
agcagcgtctggctgctgtcgcttttgcgctgcttcacggacatgctgagcatgctgcca
gagagcatacagccagcagtggtgctgcaggtggtgccgtgtcagtacctgttgcagccg
gccagtggagagagtcctctctacctgcagcacttgcgctctctggctttctccgcccac
tcgcagtgcagacgacggctgcccacgcagacgcagatcaaatctcttactggtttcggc
ccggctgccaccatcgactttctgctcaagagcccagagaaccccagctctatgcaagtg
tattctccccccttcatcctgggccctacgcgtagtaagctgcaggaggcaggagaagtg
tgctcggaggctcctgcccggtacaacatactctttgttggctactgcctgtcccacgac
cagcgctggatcctggtgtcctgcactgaccagcagggggagctcctggagacctgcatt
atcaacatagacgtccccaacaggtctcggcgtcccaagttctccccacgcaaaataggc
ctgcagaagctgtgggagtggtgcattggcatcatccaaatgacagcagtgccctggagg
attgtaattggccgtctgggtcgattaggtcacggggagctgaaagactggagtctcctg
ctgggtgaacactctctgcactcgatcagtaggcagctgcgcgaggcgtgtcgcatgtgc
ggcatctcagctgctgactcgccgtccatcctcagtgcctgcctcgtctccatggagcca
caggggtcctttgtggtcatgccagatgctgtgactatgggctcagtgttcggccgcagc
acagcgctcaacctgcagacgtctcagctaaacactccacaggacgcctcctgcacccac
atcctcgtcttccccacttcttccaccacccaggtggcccccagttcctaccccaccgag
gacaaccctgatgacatgtttggcctgccgttcccggatgagttggagaatgacattggg
catgatatgatgttttttacggggacactgcacccttcccccaacacttcgcctgtgccg
tcccctgggtccccctctgtgatgggggtgggctcccacttccagcacacacggagtcaa
ggagagcggttgctatcccgtgaggctcctgaggagctgaagcagcagcctctagctcta
ggctactacgtctccactgcccaggctgaagggcttcctcactggttttgggcctcctgt
cctcaagcgcagaatcagtgcccactgttcctcaaggcctctctacaccaccatatctcc
attgctcagacagatgagttggtctccagcaagacttctcagaggagcccacatccactg
gactccaaaaccacttcagatgtgctcaggtttgtgctggagcaatacaatgcactctcc
tggctaacatgcaaccctgccacccaagaccgccgctcctgccttcctgtgcacttggtc
atcctcatccagatgtacaacgccatcctgaatatcttatag
DBGET
integrated database retrieval system
