Colossoma macropomum (tambaqui): 118815318
Help
Entry
118815318 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118815318
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118815318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Zn_ribbon_SprT
zf-RING_6
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
118815318
NCBI-ProteinID:
XP_036437248
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MEEASISVAQDQFSCPVCLDLLKDPVAIPCGHSFCMVCINGCWDQGDQRGVYSCPHCRET
FSPRPVLRRNNMLAEVVEEVKKKLEVVSHCYAGPGDVECDSCTGRKRKAIKSCLVCLASY
CETHLKPHYQSPAFKKHRLIKASKQLQDKICSQHDEVMKIYCRTDQTCICYLCMMHEHKG
HDTVAAAAERSKKQNQLEEIQVKSQQRLQEKEKKLQEVKQAVKTLKSSAQAAVEDSERIF
TELIRSIEKKRSEVTELIRAQEEAELSGAEELLEQLEQEIADLKRRDTELEQLSHTEDHI
HFLQCFQSLCVSSGSEDSPSITVHQHLTFDGVRKSLSDLKERLEEFCKQEFSQIPPHTKK
TAAPTRILPSEPKIRKDFLKYFCQLTLDPNTVNQNLSLSEENRVVTYSGGHQLYSDHPGR
FDSWSQVLSKESVSGRCYWEVEWSSCRGWGLFISVSYKGIRRKGRGYESKFGHNSQSWSL
QCSPSLSFYHNNIHTEISASSSSRIGMYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLY
AGFWVSLGTVRLCDPN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggccagtatttcagtagctcaggaccagttcagctgtccagtctgtctggat
ctgctgaaggatccagtggctattccctgtggacacagtttctgtatggtgtgtattaat
ggctgctgggatcagggtgatcagaggggggtctacagctgcccccactgcagagagacc
ttcagtccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggaggaagtg
aagaagaaactcgaagttgtttctcactgttacgctggacctggagatgtggagtgtgat
tcctgcactgggagaaaacgcaaagccatcaagtcctgtttggtgtgtctggcttcttat
tgtgaaactcatcttaaacctcactatcagtctcctgcctttaagaagcaccggctgatc
aaagcctccaaacagctgcaagacaagatctgctctcaacatgatgaagtgatgaagatc
tactgtcgtactgaccaaacatgcatctgttatttgtgcatgatgcatgaacacaaaggt
catgatacagttgcagctgcagcagaacgatccaagaaacagaatcagctagaggagata
caggttaaatctcagcagagactccaggagaaagagaagaagctgcaggaggtgaaacag
gctgtgaagactcttaagagctctgcacaggcagcagtggaggacagtgagcggatcttt
actgagctgatccgctccattgagaaaaagcgctctgaggtaacagagctgatcagagct
caggaggaggctgaactgagtggagctgaagaactcctggagcaactggagcaggagatt
gctgatctaaagaggagagacactgagctggagcagctttcacacacagaggatcacatc
catttcctccagtgtttccagtctctttgtgtctcttctggatctgaggactcacccagc
atcactgtccatcaacatctcacatttgatggagtgaggaaatctctctctgatctgaaa
gagagactagaggaattctgcaagcaggaatttagccaaattccaccacacactaaaaag
actgcagcacctacgaggattttaccctcagagccaaaaatcagaaaagattttctaaag
tatttctgtcagctgactctggatcccaacaccgtaaatcagaacctcagtctgtctgag
gagaacagagtggtgacgtacagtgggggacaccagctttactctgatcatccagggaga
tttgacagctggtctcaggtgttgagtaaggagagtgtgagtggacgctgttactgggag
gttgagtggagcagttgtagaggttgggggttgttcatatcagtctcatataaagggatc
agaaggaaaggacggggttatgagtctaagtttggacacaacagtcagtcctggagtctg
cagtgttctccctctctctctttctatcacaacaacattcacactgagatctcagcctca
tcatcctccagaataggaatgtatgtggatcacagtgcaggaactctgtccttctacagc
gtctctgacacaatgaccctcctacacacagtccacaccacattcactcagcctctctat
gctggattctgggtgagcctgggaactgtgagattgtgtgatccaaattaa
DBGET
integrated database retrieval system
