Colossoma macropomum (tambaqui): 118815319
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Entry
118815319 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118815319
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118815319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
CMV_1a
Motif
Other DBs
NCBI-GeneID:
118815319
NCBI-ProteinID:
XP_036437249
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MTSISVDQDQFSCPVCLDLLKDPVTIPCGHSFCMVCINGCWNQDDQRGVYSCPQCRETFT
LRPVLRRNNMLAEVVEKLKKTELRAASPAHCYAGPGDVECDFCTGRKLKAIKSCLVCLVS
LCETHLKPHLQLPALVNHKLVKASTRLREKICSQHDKLIEIYCRTDQTCICYLCMLDQHK
GHDSVSAAAERIEKQRQLKVMQSESQKRIQEKEKKLQELKQAVNTIKSSAQTAVEDSERI
FTELICSIEKKRSEVTELIRAQEKTELSGAEELTEQLEQEIADLKRRDTELEQLSHTEDH
IHFLQSFQFLRVSSGSEDSPKIFISQHLSFDKVSNSLSDLKKQLEEFCEETLNRISPHGK
RSFQILLSEPQTREDFLQYYCQLTLDPNTARKNLILSEENRKVTHSYNVQCYSDHPERFN
DWSQVLCKESVSGRCYWEVEWSSEGYLYISVSYKGISRKGSGNGSKFGHNSQSWSLRCSS
SLSFWHNNIETKISAPSSSRIGVYVDHSAGTLSFYSVSDTMTLLHTVHTTFTQPLYAGFR
LPSVGSTVMLCSPQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtatttcagtagatcaggaccagttcagctgtccagtctgtctggatctgctg
aaggatccagtaactattccctgtggacacagtttctgtatggtgtgtattaatggctgc
tggaatcaggatgatcagaggggggtctacagctgcccccagtgcagagagactttcact
ctgaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactgaagaag
acagaactccgagctgcttctcctgctcactgttacgctggacctggagatgtggagtgc
gatttctgcactgggaggaaactcaaagccatcaagtcctgtttggtttgtttagtttct
ctttgtgaaactcatcttaaacctcatcttcaacttccagctttagtaaatcacaagctg
gtcaaagcttccacacgactacgagagaagatctgctctcagcacgacaaactgatcgag
atctactgtcgtactgaccaaacatgcatctgttatttgtgcatgttggatcaacacaaa
ggccacgattcagtctcagctgcagcagaaagaatcgagaaacagcgtcagttaaaggtg
atgcagagtgaatcccagaagagaatccaggagaaagagaagaagctgcaggagctgaaa
caggctgtgaacactattaagagctctgcacagacagcagtggaggacagtgagaggatc
tttactgagctgatctgctccattgagaaaaagcgctctgaggtaacagagctgatcaga
gctcaggagaagactgaactgagtggagctgaagagctcactgaacagctggagcaggag
attgctgatctaaagaggagagacactgagctggagcagctttcacacacagaggatcac
atccatttcctccagagtttccagtttcttcgtgtctcttctggatctgaagactctccc
aaaatcttcatcagtcaacatctctcatttgataaagtgagcaattctctgtctgatctg
aagaagcaactggaggaattctgtgaagagacactcaacagaatctctccacatggtaag
aggagctttcagatcttactgtcagaaccacaaaccagagaagactttctacagtattac
tgtcagctgactctggatcccaacacagcacgtaagaacctcattctgtctgaggagaac
agaaaggtgacacacagttacaatgtccagtgttactctgaccatccagagagatttaat
gactggtctcaagttctgtgtaaggagagtgtgagtggacgttgttactgggaggttgag
tggagcagtgaggggtatttgtacatatcagtctcatataaagggatcagcaggaaagga
tcaggtaatggtagtaagtttggacacaacagtcagtcctggagtcttcgatgttcttcc
tctctctctttctggcacaacaacattgagactaagatctcagccccgtcctcctccaga
ataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacaca
atgaccctcctacacacagtccacaccaccttcactcagcctctctatgctggattcagg
cttccttctgttggatctactgtgatgttatgcagtccacagtga
DBGET
integrated database retrieval system
