Colossoma macropomum (tambaqui): 118815405
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Entry
118815405 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118815405
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118815405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_10
zf-RING_5
Prok-RING_4
U-box
zf-Nse
BORCS6
FixS
Sterile
Motif
Other DBs
NCBI-GeneID:
118815405
NCBI-ProteinID:
XP_036437403
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAEASISIDQEHFTCCVCLQLLKDPVTTPCGHSFCMVCVNDFWDSERVYSCPQCRESFTP
RPVLRRNNILAEVVKTLQESRAQDSLSDCVDFSPSEVQDVECDSCVGEKKKAVKSCLTCL
ASYCDTHLQPHHESAAFRKHKLVSAFRNLQEKTCGQHDKLLEVFCRTDKRVICSLCLLDK
HKGHNTVSVQEEWMVKKKQFEDLERKYQNRLEKRETILLELKKLMESFKSSAQAAVEDSE
RIFTELILSVEKKRSEATELIRAREKAELDKAVGFVEQLEQEIVELNRKQTDLQQLSNSK
DYIQLLQRSQILCADLETSDAVKIALNQQPAFENFKTSVLQLKEQLESFCTEEWKKISEN
VNDQLISEPEAETREDFLKYARELTLDPNTVNYNLLLRECNTKVICNNERHPYPEHPERF
TYWHQVLCKQSVSLRSYWEAEVGGENGVSIAVTSKAIKRKGSEVESRFGHNSESCRLVCY
PMKYSFWHNDKQIDIPGPTYKRIGVYLDEKTGTLSFYGVSNEMTLIHKVAVKFTQPLYAG
FGIGSGSYAKFCLYATSGAAGETSKQK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtatttcaatagatcaggaacatttcacctgctgcgtctgtctgcag
ctgctgaaggatccggtgaccactccgtgcggacacagcttctgtatggtgtgtgttaat
gacttctgggacagtgaaagagtctacagctgccctcagtgcagagagtctttcacccca
agacccgtactgcggaggaacaacatactggctgaggtggtgaagacgctgcaggagagc
agagctcaggactctctctcagactgcgtggacttctctccctctgaagttcaggacgtg
gagtgcgactcctgcgtgggtgagaaaaagaaggccgtgaagtcttgtctaacctgcctg
gcctcctactgtgacactcaccttcagccccaccacgaatctgctgcattcaggaaacac
aagcttgtgtcggccttcagaaacctgcaggagaagacctgcgggcagcacgacaagctg
ctggaggttttctgccgcactgataagagagttatttgctctctgtgtttgctggacaaa
cacaaaggccataacacagtctctgtacaggaggaatggatggtgaaaaagaagcagttt
gaagatttagagaggaaataccagaaccgacttgaaaagagagagacaatcctgctggag
ctgaagaaactgatggagtcatttaagagctctgcccaggcagcagtggaggacagtgag
aggatcttcactgagctcatcctgtccgtggagaaaaagcgatctgaggcaacggagctg
atcagagctcgtgaaaaagctgaactggacaaagccgtgggattcgtggagcagctggag
caggagattgtagaacttaacagaaaacaaactgatcttcagcagctttctaactcaaag
gattacatccaattactgcagagatctcaaattctctgtgctgacctggaaaccagtgat
gctgttaagatagcgctcaatcaacagccagcatttgagaatttcaagacatctgtattg
cagctgaaggagcaactggaaagcttttgcacagaagaatggaagaaaatttctgaaaat
gtgaacgaccagctaatttcagaacctgaagcagaaaccagagaggatttcctcaaatat
gcccgtgagctgactctggatcccaacacagtaaattataatctcctgctgcgtgagtgt
aacacgaaggtgatttgtaataatgagcgtcatccctaccctgaacatcctgagagattc
acctattggcatcaggtgctctgtaagcagagtgtgtccctgcgcagttactgggaggct
gaggtgggcggagaaaatggagtttccattgcagtgacttctaaagcaatcaaaagaaaa
gggtctgaagtggagagcaggtttgggcataatagcgagtcctgcagattagtctgctat
cctatgaaatacagtttctggcacaatgataaacagattgatatcccaggcccgacatac
aaaagaattggcgtctatcttgatgaaaagacaggaactttatccttctatggtgtttcc
aatgaaatgaccctcattcataaagtcgcagtcaagttcactcagcccctgtatgctggg
tttgggataggttctggatcatatgcaaagttttgcctttatgccacaagtggtgccgct
ggtgagacctcaaagcagaaatga
DBGET
integrated database retrieval system
