Colossoma macropomum (tambaqui): 118821430
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Entry
118821430 CDS
T09004
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118821430
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118821430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
DUF6468
BshC
Motif
Other DBs
NCBI-GeneID:
118821430
NCBI-ProteinID:
XP_036445922
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSAEETISPEQISPEQIPDSTQPAMENEQEESQVAEREEESTKTLGNDNEPVDSCDGNTQ
SSTEPRPQEVTCDSCMENPRKASKSCLTCLVSYCEEHLRPHLENSKFQSHRLVEPQLDME
LRTCQHHHLDLELYCLTDSCCICSNCETEEHQGHSITPIGEARKHIEGEIQQKQKEMLKT
LSAAEQAINKLQSNTESIESSVAGVRAVIEQQFSALQAAVEDAQKSTLEILEGEHKQALN
QAESIQTHLEQRIGELKKTMAQVERLTRNKNDVDFLQEYTDWRKGLIDVCLPGVYISLID
QLATFNHVVKESTQKLCELVLSTYNVQLKELCKSEKLGIKTMVQPSSPTTQQASFPEPVT
RDDFLKYAINLSFNPDSTHKFLRLTEDNRKASNTTPWQHNYPDTSDRFEYWRQVMTSESL
YLGRHYFEVELTGEGAYVGLTYKSIDRKGQESSSCITGNDFSWCFGRESHGYSAWHSDVE
TSHEVGEFPRIGFYVDYEKGQLAFYGVAETMNLLHTYTANFLEPLYPVFWLSKKDNAVVL
VKPGD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaggaaactatctcaccagaacaaatctcaccagaacaaattccagacagc
actcagccagccatggagaatgaacaagaagaaagccaggtggcagaaagagaagaagaa
agcacaaagactttgggtaatgacaatgaacctgtagactcttgtgatggtaacactcag
tcctctactgaaccccgacctcaggaagtaacatgtgattcctgtatggagaacccccgc
aaggcgtccaagtcctgtctcacctgtttggtgtcttactgcgaggagcacctgaggcct
catctggagaacagtaagtttcagagccacaggctggtggagccacagctggacatggag
ctgcgcacctgccagcatcaccatctggaccttgagttgtactgcctgacggacagctgc
tgcatctgttccaactgcgagacagaagagcaccagggacatagcatcactccaatagga
gaggcccgcaaacatatagagggagagattcaacaaaaacagaaggaaatgctgaagact
ttgtcagcagcagaacaggccatcaacaagctacagagcaacactgaatccatagaaagc
tctgtggctggagtacgtgctgtaatcgagcagcagttctcagccctgcaagcagcagtt
gaggatgctcaaaaaagcaccttggaaatcctggagggggaacacaaacaagctctaaat
caagcagaaagcattcagacccacctagaacagaggattggtgagctgaagaagaccatg
gcgcaggtggagcggctcaccaggaataagaatgacgttgattttttacaggaatacaca
gactggagaaagggcttgatagatgtctgtttaccgggtgtttacatcagcctcatagac
cagctggccacatttaaccatgttgtcaaagaatcaactcagaagttgtgcgaactggtg
ctgtccacctataacgttcagctcaaggaactctgcaaaagtgagaaactaggtattaag
acgatggtgcagccaagttccccgaccacacaacaagcatctttcccagagcctgtaact
agggatgacttccttaaatatgccatcaatctaagcttcaatcctgactccacacacaag
ttcttgagactcactgaggacaatagaaaagccagtaacaccacaccgtggcaacacaac
taccccgatacatctgaccgcttcgagtactggcggcaagtgatgacctcagagagcctt
tacctgggccggcactactttgaggtggaactgactggagagggggcctatgtgggactc
acctacaaaagcattgatcgcaaaggccaagaaagcagcagttgcatcacaggcaatgac
ttctcatggtgttttggacgagaaagccacggctactcagcatggcactctgatgtagag
acctctcatgaagtgggagagttccccaggattggattctatgtggactacgagaaggga
cagctggccttctatggcgtagccgaaactatgaacctccttcatacgtacaccgctaac
tttcttgaaccattatatcctgtgttttggctctccaagaaggacaatgctgttgttctt
gttaagccaggcgactaa
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