Colossoma macropomum (tambaqui): 118823909
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Entry
118823909 CDS
T09004
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118823909 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118823909 (pcgf5a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
118823909 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-RING_UBOX
zf-RING_6
zf-C3HC4_3
zf-RING_10
zf-rbx1
zf-Nse
zf-C3HC4_5
DUF3337
TRAF3_RING
DUF678
Etmic-2
zinc-ribbons_6
DUF1272
Prok-RING_4
DZR
Motif
Other DBs
NCBI-GeneID:
118823909
NCBI-ProteinID:
XP_036449655
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MATQRRHLVRDFNRYITCSMCHGYLIKPTAVTECLHTFCKSCIVQHFEESNECPECGIQV
HETNPLEMLRLDKTLEEIIFKLVPGLREKEEQQEIDFWRKNKSRANGEEGPRPKKTRISE
EDDEKDDGRGGDYHRSDPQIAIYLDCLRNNGQSGESIVKGLMKKFIRCSTRVTVGTIKKF
LCVKLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLRGDSPYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccagaggaggcacctggtcagagactttaaccggtacatcacctgctccatg
tgccacggctacttgatcaaacccaccgccgtcaccgaatgcctgcacacattctgtaag
agctgcattgtccagcactttgaggagagcaacgagtgtcctgaatgtggcattcaggtc
catgaaaccaaccctttagaaatgctgaggttggataaaacgttggaagaaatcatcttt
aagttggtgcctggtcttcgagagaaggaggaacagcaagaaattgatttctggaggaag
aataaatccagagcaaatggggaagaaggccccaggcccaagaagactcggatcagcgaa
gaagatgatgagaaagatgatggaaggggcggcgattaccacaggagtgacccacagatc
gccatatacctggactgcctgcgaaacaacggccaatcaggagaaagcatagtaaagggt
ctgatgaagaagtttatccgatgctccacccgtgtcactgtaggcaccattaagaagttt
ctctgtgttaagctgaagttgccaagctcttatgagcttgacgttctgtgtaatggggaa
atcatggggaaggaccacaccctggaattcatctaccgaacccgctggagactgcgggga
gacagcccgtatcccatggttctggagtaccggccccgcatcgacttcggctaa
DBGET
integrated database retrieval system
