Colossoma macropomum (tambaqui): 118824433
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Entry
118824433 CDS
T09004
Symbol
trim3b
Name
(RefSeq) tripartite motif-containing protein 3b isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118824433 (trim3b)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118824433 (trim3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
Invasin_D3
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
YtkA
zf-C3HC4_4
Big_3_5
zf-ANAPC11
ATG17_like
MG2
Glyco_hydro2_C5
Baculo_PEP_C
DUF6389
Motif
Other DBs
NCBI-GeneID:
118824433
NCBI-ProteinID:
XP_036450470
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MDLGPSSYHAVTDVPAEVKVCRGPWPPPWMSVTMAKRETGSTSPVVRQIDKQFLVCSICL
DHYHNPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEKGVAALQNNFFITNLM
EVLQRDPECSRPEACSVLESVSAAAAGKPLSCPNHEGKVMEFYCESCETAMCLDCTEGEH
REHVTVPLRDVLEQHKAALKNQLDAIRNRLPQLTVAIELVNEISRQLTERKNEAVNEISG
TFEELERVLHQRKAALIADLENICSAKQKVLQTQLSSLQQGKENIQSSCSFTEQALNHGS
ATEVLLVQKQMSERVSALARHDFPEHPHENAHLGCQVETEGLRRSIQNLGVLLTTSAVGH
TSVATGEGLRHAVVGQHVTITVTTKDKEGELVRTGNAALKVEISGQDGGRATDIEVVDNK
NGTYEVGYTLRSEGEYSVSLLLYGQPIRGSPFRLRAVKPCDVPQSPDDVKRRVKSPSGTG
GHIRQKAVRRPSSMYSTTKKKENPIEDELIYRVGTRGREKGEFTNLQGISTSNNGRVVVA
DSNNQCIQVFTNDGQFKLRFGVRGRSPGQLQRPTGVTVDMNGDIIVADYDNRWISIFSSD
GKFKNKIGAGRLMGPKGVAVDRNGHIIAVDNKACCVFIFQSNGKLVTKFGARGTSDRQFA
EKSGANFALEQKLSKSGPGFSPHFVAVNNKNEIIVTDFHNHSVKVFSADGEFLFKFGSHG
EGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSSGSFLSYINTSADPLYGPQGLALTS
DGHVVVADSGNHCFKVYRYLQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatttagggccttcttcgtaccacgctgtgacagatgtgccggcggaggttaaggtg
tgtcgtggcccctggccccctccgtggatgtctgtcaccatggcgaagcgagagacgggc
agcacaagtccagtggtgcggcaaatagacaaacagttcctggtctgcagcatctgcctc
gatcactaccacaaccccaaagtcctgccctgcctgcacaccttctgcgaacggtgctta
cagaactacatcccaccccagtcgctgaccctgtcctgcccggtgtgccgacagacctcc
atcctgcccgaaaagggtgtggcggcgctgcagaacaacttctttatcactaatctgatg
gaggtgctgcagagagacccagagtgctcccgtcccgaggcctgcagcgtgctggagtcg
gtcagtgccgcggccgctgggaaacctctctcctgcccaaatcacgagggcaaagtgatg
gagttttactgcgagtcgtgtgaaacggccatgtgtttggactgcacggagggcgagcac
cgagagcatgtgactgtcccgctgagagacgttctggagcaacacaaagcagcactgaag
aaccagctagacgccatccgcaacaggctgcctcagctcacagtagctattgagctggtg
aatgaaatttccaggcagctaacagagcgaaagaacgaagcggtgaatgagatcagtggc
acgtttgaggagctggagcgagtgctgcaccagcgcaaggcggccctcatcgccgacctg
gaaaacatctgcagcgccaagcagaaggtgctgcagacgcagttgtcgtcgctgcagcag
ggcaaagagaacatccagagcagctgcagcttcacggagcaggccctgaaccacggcagc
gccaccgaggtgctgctggtgcagaagcaaatgagcgaacgggtcagcgctctcgcccgc
cacgacttccctgagcacccgcacgaaaacgcccacctggggtgccaggtggaaacagag
gggctgcgacgctccatccagaacctgggtgtgcttctgaccaccagcgcagtgggacac
accagcgtggccactggagagggcctgaggcacgctgtcgtcggccagcacgtcaccatc
acggtcaccaccaaggacaaagagggagaactggtgaggaccggaaacgcggctttaaaa
gtggagatttcggggcaggacggtgggcgggcaaccgatatagaggtggtggacaataag
aacggcacgtatgaggtgggctacacactgcggagtgagggcgaatactccgtctctctg
ctgctgtacggacagcccatccggggcagccccttcaggctgcgcgccgtcaaaccctgc
gacgtgccccagtctccagacgacgtgaagaggagggtgaagtcgcccagcgggaccgga
ggccacatcagacagaaagccgtgcgcagaccctccagcatgtacagcaccacgaagaag
aaagagaaccctattgaggatgagctcatctacagagttggcacaagaggcagggagaag
ggcgagttcactaatctccaaggcatctccacctccaacaatggcagagtagtagtggcg
gacagcaacaaccagtgtatacaggtgttcactaatgatgggcagttcaagctgaggttc
ggagtgcgcggccgctctccagggcagctgcagaggcctactggagtaactgtagacatg
aatggagacatcatagtggctgactatgacaaccgatggataagcatcttctcctcagac
gggaagttcaagaacaagatcggagctgggaggctgatggggccgaagggcgtggctgtg
gatcgtaacggtcacatcatcgcagtggacaacaaagcctgctgcgtcttcatcttccaa
tcaaacggaaaactggtcaccaagtttggggccaggggcacctcggacagacagtttgca
gaaaaaagtggtgcaaactttgcactggagcaaaagcttagtaaatctggccctgggttc
agtcctcactttgtagccgttaacaacaagaatgagattatcgtgacagacttccataat
cactccgttaaagtattcagtgcggatggggagttcctctttaagttcggttctcacggt
gaaggaaatggccagtttaatgctccaacaggggtggctgtggatgctaatggcaacatc
attgtagcagactggggcaacagcaggatacaggtgttcgatagctcagggtccttcctg
tcctacatcaacaccagcgcggacccgctgtacgggccgcaggggctggccctcacctcc
gacggccacgtggtggtggctgactcggggaaccactgcttcaaagtctaccgttacctg
cagtag
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