Colossoma macropomum (tambaqui): 118825061
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Entry
118825061 CDS
T09004
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmao03009
]
118825061 (ddx55)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118825061 (ddx55)
Ribosome biogenesis [BR:
cmao03009
]
Eukaryotic type
Pre-60S particles
Helicases
118825061 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_19
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
118825061
NCBI-ProteinID:
XP_036451452
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MESITDGKWNSLPVKLHDGISSTLKKLGFTYMTPVQSACIPLFMNNKDVAAEAVTGSGKT
LAFVIPVLEILLKREEKLKKMQVGALIVTPTRELAIQISEVMGQFIEEFPQFRQILLIGG
SNPIEDVEKFKTHGANIVIGTPGRLEDMFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPA
RLSNYYTICRTEDKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVTILCIH
GKMKDKRNKVFSEFRELKGGILVCTDVMARGIDIPDVNWVLQYDPPSSASSFVHRCGRTA
RIGNRGSALVFLLPMEESYVNFLSINQKCPLQLYPPVKDVVDVLPKLKALALGDRAVFER
GMRAFVSYVQAYAKHECSLIFRIKDLDFASLARGFALLRMPKMPELRGKTFPDFEEVIDT
DLIRFKDKNREKQRQKVLEQQKEKEKEALPRKNFAKNKAWSKQKSKKDKRRKMAAKRKLD
EGSDMDDEDMNELLSDTRLLKKLKKGKITEEDFDKHMRAGGSSKHKRAGPSHGSSSEAED
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggagagcataacggatggaaaatggaacagcttacctgtgaagcttcatgacggcata
tcatcgacactgaaaaaactgggatttacatatatgactccagttcagtctgcctgcatc
cccctgtttatgaacaacaaagatgttgctgctgaagcggtgactggtagtgggaaaact
cttgcttttgtaattcctgtcctagagattcttttaaaacgtgaagaaaagctgaagaaa
atgcaagttggtgctttgatcgtcacaccaacacgagagctggcaatacagattagtgaa
gttatgggccaatttattgaagagtttcctcagttcagacagattcttttgattggtgga
agcaaccccattgaagatgtagagaagttcaagactcatggtgcaaacatcgtgattgga
acacctgggcggctggaggacatgttcaggaggaaagctgatgggcttgacctggccagc
tgtgtgaaggctttggatgtattagttctagatgaggcagacaggttgctggacatgggc
tttgaagcaagcctgaatgctatcttgggatatttgcccaagcagaggcgcacaggcctt
ttctcagccacgcaaactcaggagctggagaagctggtgagggctggcctccgcaaccct
gttcgcatcactgtgaaagagaaaggagtcgcagcttctagcgtgcagaagaccccggcg
aggctgagtaattactacacaatctgtagaacggaagataagtttaacacactggtggcc
tttctgagacaacacaagcacgaaaagcagcttgtctttttcagcacatgtgcttgcgtg
gagtattttggcaaagctctggaagtcttggtcaaaaatgtcaccattctttgcatccat
ggcaagatgaaggacaagcgaaacaaagtcttctctgagtttcgggagctaaagggtggg
atacttgtttgcactgatgtgatggcaagaggcatcgatattccagatgttaactgggtg
ctccagtatgacccacctagcagcgcaagttccttcgtgcatcggtgtggccgaactgct
cgtattgggaaccgaggcagcgcgctagtctttctgctaccgatggaggaatcttatgtt
aatttcctgtctataaatcaaaaatgtccgctccagttgtatcctcctgtgaaggatgtg
gtggatgtattgcccaaactgaaggctctggcgcttggagacagggctgtgtttgagaga
ggcatgagggcatttgtctcttatgtccaggcttatgctaagcatgaatgcagccttata
ttccggatcaaagacctggactttgcatctttagctcgaggctttgctcttcttcgcatg
cccaagatgcctgagttgagaggcaagacgttcccagactttgaagaggtgatagacaca
gacttaatccgctttaaggacaagaaccgagagaaacagaggcaaaaggtgttagaacag
caaaaggagaaagaaaaagaggcactacccaggaagaactttgccaagaacaaagcctgg
tccaaacagaaatccaaaaaggacaaaaggagaaagatggctgccaaacggaagttggat
gagggatcagatatggatgatgaagacatgaacgagcttttgagtgacacgcgtctactg
aagaagctcaagaagggaaaaatcacggaggaggactttgataagcacatgcgtgcaggg
gggagttcaaagcataaaagagcaggaccctctcatgggtctagctcagaagcagaggat
gaatga
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