Colossoma macropomum (tambaqui): 118825451
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Entry
118825451 CDS
T09004
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118825451 (frem1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
CReP_N
Chordopox_A33R
Motif
Other DBs
NCBI-GeneID:
118825451
NCBI-ProteinID:
XP_036451935
LinkDB
All DBs
Position
Unknown
AA seq
2181 aa
AA seq
DB search
MTLQISTQLLLLLGLLHWTCGSLVKTNLGLRVKRGQSVFLQEGDLQFHIPRQKDACKLEV
VLHEPITQRVGTLSPQVFDCHYLVDEVKYTHNGCPILKEDTVSLRLYRFTETETYSEVFS
LHVEIMEPDCNVIKLGPQTLQVPEFYGLSNVLDGNVVSFHYEHRSNIECTVRVLTPESYL
PGHGQLVTGEPDKLEGPRGDEPDSFVSIRQQLDNKARANCKTESCLKGLKLVKITKVPCD
EFLMMGIRYQHINPPSPDIDYIAIRLDLTDTRSKSIIQSEQAWIPVTIKGAVRNQPPKPA
FMSMFILEVDQFILTPFSTATLDAVDAETPKNRLVFNITKPPSEGFITHLSDHTKPISSF
TWTDLNDMLISYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPMMVHVSIRTADTNAPRVSW
NMGLSLLEGQSRPITWEQLQIVDNDDLKGVRIITVDGLQHGRLTVRGGKGFMFTVSDIKS
GVVRYHHDDSDTTKDFVIFRITDGRHQARHKFPINILPKDDSPPFLITNMVLELSEGQTA
LLRGSILQASDMDSSDDYIMFNITRPPQAGEIMKMPGPGITGYPVTRFLQKDLFNSIIYY
RHFGNEVFDDSFEVVLSDFHDPPNLSDPQIIVVQIQPVPDQPPKEVPGATRYLVVKETDV
VYLTKQQLHFVDLESPDCELTYTVTTPPYYSNIHGGADAGRLFLVDSIPKLTKDPNAPVL
RLFTQHAVNYMKVAYMPPIHDIGPYPQHIQFVLSVTSQQGRTTTGVCFNITVLPVDNQTP
EVHVNQLTVDEGGECWVSVDHLRLTDVDSLEDSLRVELKRRPQHGEVYLDGTPLSQGQTF
TVRDLKNLKVRYHHDSSETDRDDIECTATDGVNSVDFVLPIKVTLVNDEVPVLVPELKTV
LECAEGQDVVITAEYIYATDSDSDDSRLIYMIARQPYYGVVLRNGIIVDRFIQEDINTGI
ITYKHTGQEIGLLPCHDVITFVISDGQTDAVPVCCYERRQVPNKPAPRLQDSLPVYDLNV
TVYPVDNQPPSITIGAVFKVDEGGSAAIAVTHLRASDQDTLVEDLQLILISPPQFGYIEN
ILPSPGFEKSNMGISIASFSYRDVLNQHINYVQSRHQRTEPTADQFMLCVSDGKRQSSAI
PFYIIINPTNDEAPDFLARNFTVREGDMKELDPSIINVVDLDVPRDHLTFTIIQQPQHGA
IMGRLHGNEVAHYKRSTQKHGTEVLVQDFTMEDLRNGMALMYMHDDSESEQDGFIIQLSD
GKHQLQRHMVVKVLPVNDEEPHIIRNTGIEVEAGEARLISSAVLSAHDNDTPSSDIIYVF
ESVPTHGLLQIKAGLDWVDVSAGMNCSQEDLNMNLLRYVHTAQPGVHTQDLFVFYLHDGR
NRSPAQHFHISLKELEKGDIALFVKPVRASRGEHVMITTDVLLAVDGADKPEELLYVITV
PPAHGHVEYIKHTGIPIDSFSQLDVAANLVCYVHDNRATSPRETLQFVVSNGKSTRNGTL
EILVEMTDRVLPTLVQKAGLRVPQGSTITITPDNLHLSDPDTPPHLLIFRVVQLPQYGQL
ILKGITLNAGSNFTQQNVQDLDVAYRHSGGASQIDCFIFTAADSTDRGFLVEGKVQIEPA
FFTIQIEALDSSAPRVMVLETLWKVELLKDGRYGIYISSRELKAQDANSADADLIFHILR
VPYFGYLENATNGEFVRQRFTQRDLNRRNILYIINSALEALTDSLEFAVSDPLGNTGPSH
KLEFSWARIELTKTEHHVCEGQGQLSLTIQRDGNMQDSSYVTVKVKELTASVGKDFLPAP
STLIQFDPGMASRLWKVELLQDSLEEAEETFEVTLDSPVGAILGGNSKAIVTLLDTRNGK
CGEKVPQRGTSLQGKEVPLGPYPRHGSIQVETLPITQKDGTVSARGDDLPQIVPSASKKR
LRTNGNGKKVQPSSAIRSGSEVVYTYHGIISLAVEDDTESVNTGRKAQVQVTSRGQQRSL
PVKITSQHAALSTNTQRGTAAAQITPYKLVSKPCTPELRGFLHYNESLGQLFHCNGISWK
PWAASDEAVNAQKCPQGWKYHNHHCYLLSSEGKATWSDAARSCRENFQGNLVSVLSKTDM
DWLWDFSERKPFWIGLNDRESKGRWEWVGGEPVTYTNWRRSPPRTRKKGNKKCVLVWKKT
KWQIRDCKTGRGHRYVCYVKT
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcagataagcacccagcttctccttctgctgggacttctgcattggacttgt
ggctcgctggtgaagaccaatcttggcctgcgggtgaagagaggccagtcagttttcctg
caggaaggagatttgcagttccatatacccagacagaaggatgcctgcaagctggaagtg
gttctacatgaacctattacacaacgtgtcggcacactgtctccacaggtttttgactgc
cactatttggtggatgaggtgaaatatactcataacggctgtcccattttaaaagaagat
actgtcagccttcgactatacaggttcacagagacagagacctacagtgaagtgttctcc
ctccatgtagagataatggagcctgactgtaatgttataaagctgggcccacagacgctg
caggttccagagttctatggtctttccaacgtgctggacggtaatgtggtgtccttccat
tacgagcatcgatccaacatagagtgcacagttagggtactgacaccagagtcatatcta
cctggacatggtcagctggtcactggagaacctgacaagctagaagggccgagaggagat
gaaccagatagctttgtgtctatccgacaacaattagacaataaagccagagccaactgc
aagactgaaagttgtttgaaaggactgaaactagtgaagatcacaaaagtgccctgcgat
gaattcttaatgatgggcattcggtaccagcatattaatcctccatcacctgacattgat
tacattgctatcaggctggacctcacagacaccaggagcaagagcataatccagtcagag
caagcctggattcctgtgacaatcaaaggcgctgtccgcaaccagccccccaagcctgcc
ttcatgtccatgttcatcctagaggtggaccaattcatcctgactccattctccacagcc
actctggatgcagtagatgctgagacccctaaaaacaggctggtcttcaatataaccaag
cccccaagtgagggcttcatcacacatttgtctgaccacaccaagcctatctcatcattc
acctggacggacctcaatgacatgctcatcagctaccagccccctaattccagtcacacc
caacgcagaaactatgaggtagagtttgaggtccacgatttctactttgagaaaagccag
cctatgatggtccatgtgtcaatcaggacagcagacaccaatgcaccaagagtgtcatgg
aatatgggtcttagtcttttggagggtcagtcacgtcctattacatgggagcagctccag
attgtggataatgatgatctaaagggtgtgagaattatcactgtagatggcttacagcat
gggagactgactgttagaggtgggaaaggattcatgttcactgtaagtgacatcaagtcc
ggagtggtgcgctatcaccatgacgacagcgataccaccaaagattttgtgatctttcgg
atcaccgatggccgccaccaggccagacacaagttccccataaacatcctgcccaaggat
gacagtccacctttcctcatcaccaatatggtcctggaactgtctgaggggcaaacggct
cttcttagaggatctatactgcaagcctcggatatggactccagtgatgattacatcatg
ttcaacatcactaggcctcctcaagcaggggagatcatgaagatgccaggtccaggaatt
acaggttatcctgtaacacgttttctccaaaaggatctcttcaattcgatcatctactac
aggcattttggcaatgaagtatttgatgactcttttgaggtggtcctgtcagatttccat
gatcctcccaatctctcagaccctcagatcattgtggttcaaattcagcctgtcccagat
cagccacctaaagaggttccaggagccacccggtacctagtagtcaaagagacagatgtg
gtgtatctgaccaagcagcagctgcattttgttgacttggagtcaccagactgtgagctt
acctacactgtcaccactccaccttactacagcaacatccatggtggtgctgatgctggg
aggctattcctggttgacagcatcccaaaattgacaaaggaccccaatgcccctgtgctt
agacttttcacacagcatgctgtcaactacatgaaggtggcctacatgcctcctatccat
gacatcggcccataccctcaacacattcagtttgttctgtccgtgaccagccagcaaggc
cgcaccaccactggagtctgtttcaatatcacagtgctgccagtagacaatcagacccct
gaggtgcacgtgaaccagctgacggtggatgagggtggcgaatgctgggtaagtgtggac
cacttgcgcctgactgatgtggactctctggaggactctctgcgtgtggagctgaagaga
aggcctcagcatggagaggtgtatctggatggcactcccttgagtcagggccagaccttc
actgttagggacttgaaaaacctaaaagttagatatcaccacgatagttcagagacagat
cgagatgacattgaatgcacagccacagatggagtgaattcagttgactttgttttgcct
attaaggtgaccttagtgaatgatgaagtgccagtgctggtgccagagttgaagactgtt
ctggaatgtgcagagggacaggatgttgtgatcactgcagagtacatctatgcaacagat
tcagatagtgatgacagcaggctgatctatatgattgcccgacagccttattatggtgta
gtgctgaggaatggtatcatagtggacaggttcattcaagaggacataaacactgggatc
atcacctataaacatacaggacaggagattggattgcttccttgtcatgacgtcatcact
tttgtgatctccgatggacagacagatgcagttcctgtttgctgctatgagagacgtcaa
gtgcctaacaaaccagcacctcgcctacaggactccctgcccgtctacgacctcaatgtt
actgtttatcctgtggacaaccaaccaccatctattactattggtgcagtgtttaaagtg
gatgaaggaggttctgctgctatcgctgtgacccatttaagagcttctgaccaggacact
cttgtggaggacctgcagctcattctgatctctccaccacagtttggctatattgagaac
atcctgcccagcccagggtttgagaagagcaacatgggcatcagtattgcctctttttcc
tatagagatgtactgaatcaacacataaactatgtacagtccaggcatcaaagaactgaa
cccaccgctgaccagttcatgctgtgtgtctctgatgggaaacgtcagtcttctgcaatc
cccttctatatcatcatcaatccaactaatgatgaagccccagacttcttagccaggaac
tttactgtccgagagggagatatgaaagaattggatccatctattattaacgtcgtggat
ctggatgttcccagagatcatttaaccttcactatcattcagcagcctcagcatggcgct
atcatgggcaggcttcatggtaatgaagtggcccattataaaagatccacccaaaagcat
ggaactgaggtccttgtacaagacttcaccatggaagatctcagaaatggtatggctctg
atgtacatgcatgatgactcagagagtgagcaggatggcttcattattcaactctctgat
gggaagcaccagcttcagagacacatggtggtgaaagttctgcctgtcaatgatgaggag
ccacacatcattcggaacacagggattgaggtggaagcaggagaagccagactcatctcc
agtgctgtattaagcgcccatgataacgacaccccctccagtgacatcatctacgtgttt
gaaagtgttcctactcacggcctgcttcagatcaaggcaggcctggactgggtggatgta
tcagcaggaatgaactgttcccaggaggatctgaatatgaacctgctgcgatatgtacac
acagctcagcctggagttcacacacaggacctgtttgtcttctatctgcacgatggcagg
aaccgttcccctgcacaacacttccatatctcactgaaggagctagagaaaggagacata
gcactgtttgtaaagccagtgcgagcgagccgtggtgagcatgttatgatcaccactgat
gtcttgctggctgtggatggtgctgacaagccagaagagctgctgtatgtcatcactgta
cccccagcgcatggtcatgtggagtacatcaaacacactggcattcccattgactctttc
agccagctggatgtagcggctaatctggtgtgctacgtccatgacaacagagctacttca
cctagagagacactgcaatttgtcgtcagtaatggaaaatccacccgtaatggtactctg
gagattttggtggagatgacagacagggttctgcctacgctagtacagaaagctggtcta
cgggttcctcaaggttcaactatcaccataacccctgataaccttcacctgtctgaccca
gacacccctccccatttgttgatctttagggtggtccagctgccgcagtatggtcaactg
attttgaaggggattactctaaatgcagggagtaactttacccagcagaacgttcaggat
ctggatgttgcatacagacattctggtggagcttctcagattgactgctttatattcact
gctgctgatagcactgacagaggctttctggtggaagggaaggtgcagatagaaccagcc
ttcttcaccatccagattgaagcattagacagctctgctcctagagtaatggtgctggaa
actctgtggaaagtggagcttctcaaagatggacgttatggaatctacatctcgtccaga
gagttgaaggcccaggatgcgaactctgcagatgctgacctcatctttcacatactcaga
gttccttactttggttacttggagaatgccaccaatggtgagtttgtgcgtcagcggttc
actcagagggatctgaacaggaggaatattctctatataattaactctgccctggaggcc
ttgactgacagtctggagtttgcggtctctgatccattgggcaacactgggccatctcac
aagttagagttcagctgggccagaatcgagctgacaaagacagagcatcatgtgtgtgaa
ggccaaggacaactatcgcttaccattcaaagggatggaaatatgcaggattcatcgtat
gtaactgtcaaggtaaaagagctaacagcatctgttggaaaggatttcttgcctgctccc
tcaactttgattcagtttgaccctggcatggccagtcgactgtggaaggtggagctgttg
caggattctctggaggaggctgaggaaacatttgaagtgaccctggattctcctgttgga
gctattctaggaggaaactcaaaagccattgtaacactactggacaccagaaacgggaaa
tgtggtgagaaagttcctcagaggggtacaagccttcagggtaaggaggtaccactaggg
ccctacccaagacatggctccatacaggtggagactttacctatcacacagaaagatggg
acagtcagtgccagaggtgatgatttacctcaaatcgttccttctgcctctaaaaaaaga
ctgagaaccaatggcaatggaaagaaagttcaaccttcttcagccattcgaagtggatct
gaggttgtttacacttatcatggtatcatatcactggcagtggaggatgacaccgagtct
gttaacactggaaggaaggctcaagttcaagtgaccagtagagggcagcagcgttcactc
ccagtcaaaatcacaagccagcatgcagcattgtctacaaatacacaaagaggcactgct
gctgcccagatcacaccatataaacttgtctctaaaccttgcactccagaattgagaggt
tttcttcattataatgagagtttaggccagctcttccattgcaatggaatctcctggaaa
ccatgggctgctagcgatgaggcagtgaatgctcagaagtgtccacaggggtggaaatac
cataaccaccactgctatctgctgagctcagagggcaaagccacatggagcgatgctgcc
aggtcgtgccgagaaaacttccaaggcaaccttgtcagtgtcctatcaaagacagatatg
gactggctctgggacttcagcgagagaaaacccttctggattggcttgaatgaccgagaa
agtaaaggccgctgggaatgggtgggcggagaacctgtcacttacaccaactggaggcgg
agtcctccccgaaccagaaagaaaggaaacaagaagtgcgttttggtctggaagaagaca
aagtggcaaatacgagattgcaagacaggaaggggacaccgctatgtgtgctatgtgaaa
acatga
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