Colossoma macropomum (tambaqui): 118826079
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Entry
118826079 CDS
T09004
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118826079
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118826079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
SPRY
zf-Nse
U-box
Y1_Tnp
FapA
zf-RING_6
Spc29
Motif
Other DBs
NCBI-GeneID:
118826079
NCBI-ProteinID:
XP_036452858
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MAAASISVAQDQFSCPVCLEPLKDPVTIPCGHSFCMVCINDCWNQEDQKETYSCPQCRHS
FTPRPVVGKNAMLADIMEKMKKARLLGAPPAHCSSGHEDVECDFCTGRKRKACSSCLVCL
ASYCKTHLQPHYESPAFKKHKLVKASRRLQEQICSQHEKLLEVYCRTDKQCICMLCMLDD
HKGHDTVSTATERADKQKLLVGTQKKCQERIQEREKELQELRKAVESHKHSAQAAVQDSE
RIFTELISSIERKRSEVTEMIRAQVKAAVIRAEEILRQLEQEIAELRRRDAELEQLSHSE
DHIHFLQSFQSLSEHPGPSDSSPITVTPLLSFEEVTKSVSQLRDRVEELCHREFRKTSNT
VKEIQIIPLPEPQSREEFLQYSCELTLDPKTVNNYLCLSEGNTVVTCSEKAQTYPDHPDR
FDHYLQVLSRESASGRCYWEVEWSGATGVSVAVAYKTIRRKGKGDECLFGRNDHSWRLFC
TPSSFSFRHSKKETEIWGEFDTCGMNFHSVVVEEVGLAGIRRRSDKPLPGGSLSEQTGVI
RLTDAAVTVLPSPRSPVCSAL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccagtatttcagtggctcaggaccagttcagctgtccagtctgccttgaa
ccactgaaggatccggtgaccattccctgtggacacagtttctgtatggtgtgtattaat
gactgctggaatcaggaggatcagaaggaaacctacagctgccctcagtgcagacactcc
ttcaccccgagacctgttgtgggtaaaaacgccatgctggctgacataatggagaaaatg
aagaaggcgagactcctgggtgctcctcctgctcactgttcttctggacatgaagatgtg
gagtgtgatttctgcactgggagaaaacgaaaagcctgcagttcctgtctggtgtgtctg
gcctcttactgtaaaactcacctgcagcctcactatgaatctcctgcctttaagaagcac
aagctggtcaaagcgtccagacgactccaggagcagatctgctctcagcatgagaagctc
ctggaggtttactgtcgcactgacaagcagtgtatctgcatgctttgtatgctagatgac
cataagggacacgatacagtgtcaactgcaacagaaagagctgacaaacagaaacttttg
gtggggactcagaaaaaatgccaagaaagaatccaggagagagagaaggagcttcaggag
ctgaggaaggctgtagagtctcacaagcactctgctcaggccgcagtgcaggacagtgag
aggatcttcactgagctgatcagctccattgagaggaaacgctctgaggtgacagagatg
atcagagctcaggtgaaagctgcagtgattcgagctgaagaaatcctgaggcaactggag
caggagatcgctgagctgaggaggagagacgctgagctggagcagctttcacactcagaa
gatcacatccatttcctccagagtttccagtctctctccgagcaccctggaccttcagac
tcatcccccatcactgtcactcctcttctctcttttgaggaggtcacaaagtctgtgtct
cagctgagggacagagtggaagaactttgtcaccgagagttcagaaagacatccaataca
gtgaaagaaatccagatcattcctcttcctgaaccccaaagcagagaagagtttctacaa
tactcctgtgagctcacactggatcccaaaacagtaaataattacctctgtctgtctgag
gggaacactgtggtgacctgcagtgaaaaagcacagacatatcctgaccatccagacaga
ttcgaccactacctccaagtgctgagcagagagagcgcgagtggacgctgctactgggag
gttgagtggagcggggctacaggtgtttctgtagctgtggcgtataaaaccattcgcagg
aagggaaaaggtgacgagtgcttgtttggacgaaatgaccactcctggagattgttctgc
actccgtccagtttctcattccgacacagcaaaaaagaaacagaaatctggggtgagttt
gacacctgtggtatgaacttccactcagttgtagtggaggaggtggggttggccggaata
cggcgtcgctcagataaaccgttaccgggaggttcgctttctgaacaaaccggtgtgatt
cgactcacggacgctgccgttaccgtcctcccctcaccgcggagccccgtctgctctgct
ctgtaa
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