Colossoma macropomum (tambaqui): 118826835
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Entry
118826835 CDS
T09004
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118826835 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
118826835 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
cmao04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118826835 (pdlim5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
118826835
NCBI-ProteinID:
XP_036453737
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSSNYSVELQGPAPWGFRLQGGKDFNMPLAISRVTDIGKAAKAGIAVGDLVLTINGVSTD
NMNHLEAQNKIKACTGNLSLNLQRVPSVQKPAVPPKTTTVTINAPATVSKVPVNRIPRKP
ITQTDIEFYHVPTHADASRKRIMEDTEDWRPRTGTSQSRSFRILAQITGTEAEGAQPKET
ETAKQTVNEVLQCELRAHVTSPVKTMIKGSGSPVKNTAGLITPTFGSVSSSPPLGPALDR
PMPRPHPKDEASLVQRAEHIPAGTRTPVCAHCDAVIRGPFLVAMGSSWHPEEFVCVRCGE
CLSERGFVEDEGSVYCTQCYELYLAPTCARCSYKILGEVINALKQTWHVYCFLCVSCQQP
IRNNTFHLEDGEPYCERDYNGLFGAGCHGCDFPIEVGDKFVEALGFTWHDTCFVCAVCCT
SLEGQTFFSKKDKPLCRKHASTPQP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaattacagcgtggagctgcagggccccgccccctggggcttcagactgcag
gggggcaaagacttcaacatgcccctcgccatctcacgggtgacagacattggtaaggca
gctaaagctggcattgcagtaggtgacctggtgttgaccatcaatggagtcagtacggac
aacatgaaccatctggaggctcagaacaaaatcaaagcctgcactggaaacctcagtctt
aacttgcagagagtgcccagtgttcaaaaaccagctgtacctccaaagacgactacagtg
acaataaacgctcctgctactgttagtaaagttccagttaacaggatcccccgtaagccc
atcacacagaccgatatagagttctaccacgttcccactcacgctgacgccagcaggaag
cgcatcatggaggacacagaagactggaggccaaggacaggaacatctcagtcccgctcc
ttccgtatcctcgcccaaatcaccggcaccgaggctgagggagctcagccaaaggagact
gagactgctaagcagaccgtgaatgaagtgttgcagtgtgaactgagagctcatgtgacg
tcacctgtaaagaccatgatcaaaggctccggatcacctgttaaaaacacagcaggtctg
atcactcccacctttggctctgtgagcagcagtcctccattaggccccgccctggaccgg
cccatgccacgcccacatcctaaagatgaagcctcattggtccagagggcagagcacatt
cctgctggaacacgcacacctgtgtgtgcccactgtgacgccgtcatcaggggtccgttc
ctggtggcgatgggcagctcgtggcaccctgaggagtttgtgtgtgtgcggtgcggagag
tgtctgagtgagcggggcttcgtagaggacgaggggagcgtgtactgcacacagtgctat
gagctgtacctcgctcccacctgcgcccgctgcagctacaaaatactgggggaagtgatc
aatgcactaaagcagacgtggcatgtgtactgcttcctgtgtgtctcgtgccaacagcca
atcagaaacaacaccttccacctggaggacggagaaccgtactgcgagagagattataat
ggtctgtttggagctggttgccatggctgcgatttccccatagaggtgggcgataagttt
gtggaggctctgggcttcacctggcatgatacctgcttcgtgtgtgcagtgtgctgcacc
agcctggagggtcaaaccttcttcagtaaaaaagacaaaccgctctgcaggaaacacgcc
agcacaccccagccttaa
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