Colossoma macropomum (tambaqui): 118827334
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Entry
118827334 CDS
T09004
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
cmao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118827334 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
118827334 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118827334 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118827334 (gtf2h2)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118827334 (gtf2h2)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118827334 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Castor1_N
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
118827334
NCBI-ProteinID:
XP_036454549
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLRATVEDILFQARRKRVFESHGQVRLGMMRH
LYVVIDSSRTMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHIAAMKKAVNSTCVGEPSLYNALNIAMQTLKHMPGHTSREILVIFSSLTTCDPA
NIYDLIKTLKALKIRVSVIGLSAEVRVCTVLTRETGGNYNVILDESHFKELLMYHVKPPP
ASSSSECSLIRMGFPQHIIASLSDQDAKPSFSMSHLESSDGSPGLTLGGYYCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDAFQERPLEEHTGDRFCQACQGELKDKSVFT
CPACSSVFCTECDLFIHDTLHCCPSCIHRQGAS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagccggagagagcgaagaggtgggaaggaggctacgagcggacatgggag
gtgctgaaggaggacgagtctggatccctcagagccaccgtagaggacattctcttccag
gccagaagaaagagggtgttcgaaagtcatggacaggttcggctgggaatgatgcgtcac
ctatacgtggtgatcgactcttctcggacgatggaggaccaggacctgaagcctaacaga
ctcacatccaccctcaagctgatggagtattttgtggaagagtactttgaccagaaccct
ataagtcagattggaatcatcaccaccaagaacaaaagggctgagaaactgaccgatcta
gcaggcaaccctaagaagcacatagcagccatgaaaaaagcagtaaactccacgtgtgtt
ggagagccgtccttgtacaacgctctcaacatcgccatgcagacactcaaacacatgcca
gggcacactagcagagagattctggtcatcttcagcagtctgaccacctgtgatccagcc
aacatctacgacctgatcaaaactctgaaagcactgaaaatccgagtgtcagttattggg
ctgtctgcagaggtgcgggtgtgtaccgttctaaccagagaaacaggaggaaactacaac
gtgatcctggacgagagccattttaaggagttgctcatgtatcacgtgaagccgcctccc
gccagctcctcctccgagtgctccctcattcgcatgggcttccctcagcacatcatagct
tccctgtctgatcaggatgccaagccttccttcagcatgtcgcacttggagagttcagat
gggagtcctggactcactctcggcggatactactgccctcagtgcagggccaaatacacc
gaactgcctgtagagtgtaaagtgtgcggtttgacgctggtttccgctcctcacctggct
cgctctttccaccacctcttcccccttgatgcctttcaggagcgccccctggaggagcac
acaggagacaggttctgccaggcctgtcaaggagagctgaaggacaaaagtgtattcaca
tgtccagcctgcagcagtgttttctgtacggagtgcgatctcttcatccatgacacgctg
cactgctgcccgtcctgcatacacagacagggagcgtcctga
DBGET
integrated database retrieval system
