KEGG   Cucurbita maxima (winter squash): 111466514
Entry
111466514         CDS       T05246                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03013  Nucleocytoplasmic transport
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111466514
  09122 Translation
   03013 Nucleocytoplasmic transport
    111466514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111466514
   03041 Spliceosome [BR:cmax03041]
    111466514
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111466514
Spliceosome [BR:cmax03041]
 Complex C
  Other components
   EJC/TREX
    111466514
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111466514
SSDB
Motif
Pfam: efThoc1 DUF6033
Other DBs
NCBI-GeneID: 111466514
NCBI-ProteinID: XP_022966961
UniProt: A0A6J1HPE8
LinkDB
Position
Unknown
AA seq 608 aa
MEEFRKAILQTAPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQS
AEPIMQYGMSIDDNETAQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFT
SSLAVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKNEKDVPSETMREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENN
WVWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
RTPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPD
GPSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGEIDA
EVDLDTAG
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggaagagttccggaaagccatattacaaacggcgccaccagaaaattttgctctgcag
acagttcaagatgttatcaaacctcagaagctcacaaaattggcacaagatgaaaatcag
ttgctggagaatattctaaggcgattacttcaagaattggtgtcatctgcagctcagtca
gcggagccaataatgcagtatgggatgtctattgatgacaatgaaactgctcagggtcat
attccgcgtcttctagacattgttctctatctttgtgagaaagagcatgtcgaaggaggt
atgatattccagctgttggaggatctgactgaaatgtcaacattgaggaactgcaaagat
atttttggttacattgagagtaaacaagatatattgggaaagcaagagctttttgctcgt
ggaaaacttgtcatgttgagaacgtgcaatcaattgcttcgccgtctatcaaaggcaagt
gatgtggtgttttgtggacgcattctgatgtttctagcacattttttccctttatctgaa
cgttctgctgtgaatataaaaggagtgttcaacacctccaatgaaacaaaatatgagaaa
gaacccccagatggcttttctattgatttcaacttttacaagaccttttggagtttacag
gaatacttctgtaatcctgcctcccttactcttgcttcaacaaagtggcaaaagttcaca
tcgagtttagcggttgtgttgaatacctttgatgcacaacctttgtccgatgaagaggga
gatgctaacatgttggaggaggagtcagcaaccttcagcataaaatatcttactagtagt
aaactgatgggtttagaattaaaggatccaagttttcgacgccacgttcttgtgcagtgc
cttatattgtttgattatctaaaggccccaggaaagaatgagaaagatgttccatctgaa
accatgagagaagaaattaaatcttgcgaggagcgtgtgaagaagttgcttgaggtgaca
ccgccaagagggaaagaatttcttcagaagattgagcatatattagaacgtgaaaataat
tgggtgtggtggaaacgtgatggttgccctccttttgaaaagcaaccaattgaaaagaaa
accacccatgatgcaactaaaaaacgtaggccaaggtggagattagggaacaaagaactc
tctcaattgtggaagtgggctgatcagaatccgaatgctttgactgatcctcaacgtgtc
cgcactcctgcaatttctgagtattggaaacccttggcagaggatatggacgagtctgct
ggaattgaagcggaataccatcataaaagtaaccgagtttattgctggaaaggccttcga
ttttcagctcggcaggacttggaaggattttctcgattcaccgaccatggcattgaagga
gtcgtgcctttggaactcctgccacctgatgtacgatccaaataccaagctaaaccaaat
gagagatctaaacgtgctaagaaggaagaaacgaaaggggccgtgcgtcaagctgaagaa
aatcagatggcaacaccagctagtgagaatgatggtgaaggaaccagaagtgaccctgat
ggaccatcagtggcgatggatgccgatacaaccgttgctgctggcagtgtatctcaaggc
ggtactccaactccagaagaaaataaacaaagctccgacaccgatattggtcaagaggca
ggccagttggaggccgatgccgaggtagagccgggtatgatcgatggcgagatagatgca
gaggttgatttggatactgcaggttga

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