Cucurbita maxima (winter squash): 111466514
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Entry
111466514 CDS
T05246
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111466514
09122 Translation
03013 Nucleocytoplasmic transport
111466514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111466514
03041 Spliceosome [BR:
cmax03041
]
111466514
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111466514
Spliceosome [BR:
cmax03041
]
Complex C
Other components
EJC/TREX
111466514
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111466514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
DUF6033
Motif
Other DBs
NCBI-GeneID:
111466514
NCBI-ProteinID:
XP_022966961
UniProt:
A0A6J1HPE8
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MEEFRKAILQTAPPENFALQTVQDVIKPQKLTKLAQDENQLLENILRRLLQELVSSAAQS
AEPIMQYGMSIDDNETAQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMSTLRNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAHFFPLSE
RSAVNIKGVFNTSNETKYEKEPPDGFSIDFNFYKTFWSLQEYFCNPASLTLASTKWQKFT
SSLAVVLNTFDAQPLSDEEGDANMLEEESATFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFDYLKAPGKNEKDVPSETMREEIKSCEERVKKLLEVTPPRGKEFLQKIEHILERENN
WVWWKRDGCPPFEKQPIEKKTTHDATKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
RTPAISEYWKPLAEDMDESAGIEAEYHHKSNRVYCWKGLRFSARQDLEGFSRFTDHGIEG
VVPLELLPPDVRSKYQAKPNERSKRAKKEETKGAVRQAEENQMATPASENDGEGTRSDPD
GPSVAMDADTTVAAGSVSQGGTPTPEENKQSSDTDIGQEAGQLEADAEVEPGMIDGEIDA
EVDLDTAG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttccggaaagccatattacaaacggcgccaccagaaaattttgctctgcag
acagttcaagatgttatcaaacctcagaagctcacaaaattggcacaagatgaaaatcag
ttgctggagaatattctaaggcgattacttcaagaattggtgtcatctgcagctcagtca
gcggagccaataatgcagtatgggatgtctattgatgacaatgaaactgctcagggtcat
attccgcgtcttctagacattgttctctatctttgtgagaaagagcatgtcgaaggaggt
atgatattccagctgttggaggatctgactgaaatgtcaacattgaggaactgcaaagat
atttttggttacattgagagtaaacaagatatattgggaaagcaagagctttttgctcgt
ggaaaacttgtcatgttgagaacgtgcaatcaattgcttcgccgtctatcaaaggcaagt
gatgtggtgttttgtggacgcattctgatgtttctagcacattttttccctttatctgaa
cgttctgctgtgaatataaaaggagtgttcaacacctccaatgaaacaaaatatgagaaa
gaacccccagatggcttttctattgatttcaacttttacaagaccttttggagtttacag
gaatacttctgtaatcctgcctcccttactcttgcttcaacaaagtggcaaaagttcaca
tcgagtttagcggttgtgttgaatacctttgatgcacaacctttgtccgatgaagaggga
gatgctaacatgttggaggaggagtcagcaaccttcagcataaaatatcttactagtagt
aaactgatgggtttagaattaaaggatccaagttttcgacgccacgttcttgtgcagtgc
cttatattgtttgattatctaaaggccccaggaaagaatgagaaagatgttccatctgaa
accatgagagaagaaattaaatcttgcgaggagcgtgtgaagaagttgcttgaggtgaca
ccgccaagagggaaagaatttcttcagaagattgagcatatattagaacgtgaaaataat
tgggtgtggtggaaacgtgatggttgccctccttttgaaaagcaaccaattgaaaagaaa
accacccatgatgcaactaaaaaacgtaggccaaggtggagattagggaacaaagaactc
tctcaattgtggaagtgggctgatcagaatccgaatgctttgactgatcctcaacgtgtc
cgcactcctgcaatttctgagtattggaaacccttggcagaggatatggacgagtctgct
ggaattgaagcggaataccatcataaaagtaaccgagtttattgctggaaaggccttcga
ttttcagctcggcaggacttggaaggattttctcgattcaccgaccatggcattgaagga
gtcgtgcctttggaactcctgccacctgatgtacgatccaaataccaagctaaaccaaat
gagagatctaaacgtgctaagaaggaagaaacgaaaggggccgtgcgtcaagctgaagaa
aatcagatggcaacaccagctagtgagaatgatggtgaaggaaccagaagtgaccctgat
ggaccatcagtggcgatggatgccgatacaaccgttgctgctggcagtgtatctcaaggc
ggtactccaactccagaagaaaataaacaaagctccgacaccgatattggtcaagaggca
ggccagttggaggccgatgccgaggtagagccgggtatgatcgatggcgagatagatgca
gaggttgatttggatactgcaggttga
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