KEGG   Cucurbita maxima (winter squash): 111484454
Entry
111484454         CDS       T05246                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03420  Nucleotide excision repair
cmax04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111484454
  09124 Replication and repair
   03420 Nucleotide excision repair
    111484454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmax04121]
    111484454
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111484454
Ubiquitin system [BR:cmax04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111484454
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111484454
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 111484454
NCBI-ProteinID: XP_022986830
UniProt: A0A6J1JF47
LinkDB
Position
Unknown
AA seq 562 aa
MAPTTRSFSFPRVIIEKDTDSEQSSSEEDDDEEPLHDEDEDEGENGKDSENDGQRIEEES
NNKGKAPITISLKKVCKVCKRTGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRVAT
EFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFHP
TNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTIS
CTDMETGISSSLMNLNPDGWQGPNNWRMLYGMDINPEKHAVFVADNFGFLYLVDTRSNNK
SGQAVLIHKKGSKVVGLHSNPLQPDLLLSCGNDHFARIWDIRQLVAGSSLHDLAHRRVVN
SAYFSPISGCKILTTAQDNRIRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDP
SESLAVIGRYISENYNGIALHPIDFIDVSTGQLVAEVMDLNITTISPVNKLHPRDDVLAS
GSSRSLFIWRPKDDHEPTEQKDERKIVICTGTEKKRKHKSKNDGSDDDDSDVDKFTPTLK
GKNLKSTKSATKMRNTPRKMKR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggctccgacgacgagaagtttctcatttcccagggtgataatcgagaaggacaccgac
tccgagcagagttcgtcggaagaagacgacgatgaagaacctcttcacgacgaagacgaa
gatgaaggggagaatggtaaagattccgaaaatgatggccaaaggattgaagaggagtcc
aacaataagggaaaagcccccattactatcagtctcaagaaagtgtgcaaagtttgtaaa
aggactggtcatgaagcggggtttaaaggggctacgtacatagattgccctatgaaacca
tgttttctctgcaagatgcctgggcatacaacaatgtcatgcccgcatcgggtggctact
gagtttggtgtcattccagcatcccataagaatactcgtaatgcacttttatatgtcttt
gagcggcagtttaagccgcatattcctcctatcaaaccagcatatgtgatcccagatcaa
gtgaactgtgcagttataaggtaccatagtagacgtgtaacgtgcctggagttccatcct
acaaacaaccggcttcttttatctggagacaagaaaggacaagttggagtttgggattat
gataaagtgcacgagaaggtagtctatggaaatatacattcttgtatcgtaaataacatg
aggttcagtcctacaaatgacggtatgatatatgcagcatcttctgatggaaccattagt
tgcacagatatggagactggaatttcttcttcattaatgaacctcaaccctgatggttgg
cagggccctaataattggaggatgctatatggcatggatatcaacccagagaagcacgct
gtgtttgtcgctgacaattttggttttctatacttggtggatacaaggtcaaacaacaaa
tctgggcaggctgttttgatccataagaagggtagcaaagttgttggactgcactctaat
cctcttcaacctgatcttctcttgagttgtggaaatgatcattttgctcgaatatgggac
attcgccaattagtagctggttcttcattgcatgatctagcacacagacgtgttgtaaat
tctgcttatttttctcccatctccggttgcaaaattcttacaacggctcaggataaccgc
attcgtgtatgggactctatatttggcaacttggattcacctagtcgagaaattgtgcac
agtcatgattttaaccgacatttgactccttttcgagcagaatgggatccaaaggaccca
tctgaatcgcttgcggttatcggtcgctacataagtgaaaactataatggaattgccttg
catcccatcgattttattgacgtcagcacggggcaattagtcgctgaggtaatggatctg
aacataaccacaattagtccagtgaacaagctacatccacgggatgatgttttggcgtct
gggagttcaagatcccttttcatttggaggccaaaggatgaccatgaaccaacagagcag
aaggacgaaaggaaaattgttatttgcaccggaacagagaagaaacgcaagcacaagtcg
aaaaatgatggaagtgatgacgatgattccgatgtcgataagttcacaccgaccctgaaa
ggtaaaaacttaaagtcaacgaaatctgcaactaaaatgaggaacactcctcgcaaaatg
aaacgttaa

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