Cucurbita maxima (winter squash): 111491171
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Entry
111491171 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111491171
03036 Chromosome and associated proteins [BR:
cmax03036
]
111491171
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111491171
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
111491171
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111491171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111491171
NCBI-ProteinID:
XP_022995722
UniProt:
A0A6J1JZR9
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MKNKALVEALGTEEAFEQRSDDLVLSDKKKKKSKGDKESKKRKAVEVADDEDRSETSSEL
GEPVNSRLKSGKEKKSSKKTKVVESDEDDAEKEVEDPNAVSRFRISEPLKARLKEKGIIA
LFPIQAMTFDTVYDGFDLVGRARTGQGKTLAFVLPILECLINGPSKSSRGTGFGRSPSVI
VLLPTRELADQVFEDFKFYGHALGLESCCLCGGMLYGPQETKLRRGVDIVIGTPGRVKDH
INRNNIDLRSLKFRVLDEADEMLRMGFVDDVEFILGKVEDVNKVQTLLFSATLPDWVKTI
ASRFLKANKKTADLVGNEKMKASKDVRHIVIPCSDSERSRLIPDIIQCYSSGGRTIIFTE
TKESASELAGLLPGARALHGDIQQSQRSVTLSGFRSGKFLVLVATNVAARGLDINDVQLI
IQCEAPKDIEAYIHRSGRTGRAGNTGVAVTLYDPRKSGRISRIERDSGVKFEHLSAPQPI
DIARCAGAGAVESITQVSDSVIPPFKSAAEELVNNSSLSAVELLAKALAKLSGYTEIKSR
SLLTSMENHVTLILEAGKPIFSPSFAYSVLRRFLPEEKVESVKGMTLTADGYSAVFDVQT
EDLDAFLTGQGNAANVSLEVLKTLPKLQDREQSRGGGRFGGGGGGRGGFGSDRRNGGGRF
SGGRGGGGGGRGGFSDRRNNRFSGSNSGGGGRGRSFGGGSNW
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaagctctcgtggaagccctaggtactgaggaagcttttgagcagaggagt
gacgatttggttctttcggataagaagaaaaagaagagtaagggtgataaagaaagtaag
aagcgaaaagctgtagaagtggctgacgacgaggataggagtgagacgagctcggagttg
ggtgaacctgtgaattctaggttgaaaagcggaaaggaaaagaagagctcgaagaagacg
aaggtggttgagtctgacgaagatgacgcggagaaggaggttgaagatccgaatgccgtt
tctaggtttcggatttcggagccgcttaaggcgaggctgaaggagaagggtattatcgcg
ttgtttccgattcaggctatgacgtttgacacagtatatgacgggtttgatttggttgga
cgagccagaacgggacagggtaaaacattagcttttgtcttgcccatcttggagtgttta
ataaatgggccttctaaatcatcacgagggactggattcggaaggtctcctagtgttata
gtacttttacctactagggaattagctgatcaggtgttcgaggacttcaaattttatggt
catgccttaggcctggagtcttgctgtttatgtggaggaatgctttatgggccccaagaa
actaaattacgaaggggggttgatatagttattggaacaccgggccgtgttaaggatcac
attaacagaaacaatattgatttgcggtctctaaagtttagggttcttgatgaagctgat
gaaatgttgagaatgggttttgttgatgatgttgaatttattcttggcaaagtggaggat
gtaaacaaagttcaaacacttcttttcagtgccactttaccagactgggtgaaaactatt
gcttctaggttccttaaggcaaacaagaaaactgctgatcttgttggtaatgagaaaatg
aaggccagtaaggatgttaggcatattgttattccttgctctgattcagaacggtctcgg
ctcattcctgatatcattcaatgctacagcagtggaggccgaactattatatttacggag
acaaaggaatctgcatcagagcttgctggtcttctcccaggagcacgagcattgcatgga
gatatacagcagtctcaacgttcggttaccctttctggattcaggtcaggcaagtttctg
gtattagtggccaccaatgtggcagcacgtgggttggatatcaatgatgttcagttaatt
atccagtgtgaggctccgaaggacatagaggcttatatccatcggtctggaagaacagga
agagctggcaacactggagttgctgtgacattgtatgatccaagaaagtcgggaagaatt
tccaggatagaacgagattctggtgtgaagtttgagcatttgtctgctccccagcctatt
gatatagccagatgtgctggagctggtgctgtagaatcaataactcaagtctctgacagt
gtaatcccacccttcaagtctgctgcggaggagttggtgaacaactctagtttgtctgct
gtggagttacttgccaaggctcttgccaagctctctggttatacagagataaagagcaga
tcacttctgacatcgatggaaaatcacgtcactttaattctcgaggctggaaagcctatc
ttttccccatcatttgcctacagtgtcttgaggagattcttgcccgaggagaaggttgag
tcagttaagggtatgacactgacggctgatggatacagtgctgtgttcgatgttcaaaca
gaagatctggatgcatttcttactggtcagggaaatgcagccaatgtgagtctagaggtg
ttgaaaacactgccaaaactgcaagacagagagcagtcaagaggaggtggtagatttggt
ggtggtggtggtggtcgtggaggattcggcagtgatcgcagaaacggtggtggtaggttc
tcaggaggacgaggtggtggtggtggtggccgtggaggattctctgataggagaaataac
cggttttcgggcagcaattcgggtggtggaggaagaggtcgaagctttggcggaggtagc
aattggtaa
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