Cucurbita maxima (winter squash): 111497858
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Entry
111497858 CDS
T05246
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111497858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111497858
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
SR proteins
111497858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111497858
NCBI-ProteinID:
XP_023004613
UniProt:
A0A6J1KWS8
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MSGRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
AIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRHSSYGGSRGGRGVSRRSDYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNLDDMKYAIKKLDDSEFRNAFSRA
YVRVREYDSKKDRSRSPSRGRSYSRERTCSRSRSRSRGRSRSKSRSRSKSRSRSSKSPKA
KSSQRSPVKSRSRSVSPARSRSKSPSLSGSRSRSRSPLPNREKRTSKSPNRRDASKSPSR
SRSKSKSPSR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgtgccagcagaacagtgtatgtcggcaatctcccgggtgatattcgtgaa
aaggaagtggaagatttattttataagtatggtcgcatagctcacattgatctcaaggtt
ccaccaaggcctccaggttatgcatttgttgagtttgaagatgcggaagatgctcaagat
gctattcgtggtcgtgatggctatgattttgatggtcataggttgcgtgtggagcttgct
catggtggtcgtggtcattcatcttccagtgatcgtcatagtagttatggaggcagccga
ggtggccgtggagtatctcggcgctctgattatcgtgtattagtcacaggattaccttct
tctgcttcatggcaagacttaaaggatcatatgcggcgagctggggatgtttgtttctcc
caagtgttccgtgatggtagtggaaccacagggattgtggattacaccaaccttgatgac
atgaagtatgcaattaaaaaacttgatgactctgagtttcgcaatgcattttctcgggca
tatgttcgtgtgagagaatatgattcaaagaaggatcgctccaggagtcctagtcgtggg
cggtcatattctagagagaggacttgtagtcgcagtcgcagtcgtagcagaggccgaagt
aggagcaagagccgcagtaggagcaagagccgcagtaggagcagcaagtccccaaaagct
aaatcttcccagcgatcacctgttaaatctcgatcaaggtctgtttcccctgctcgctct
cggtcaaagtcaccatctctttctggatcccgatcaagatccagatctccattgcccaat
cgtgagaaacgtactagtaaaagtcctaaccggcgtgatgctagcaaaagccctagcaga
agcaggagtaagagcaagagcccgtcccggtag
DBGET
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