Clavibacter nebraskensis: CMN_00250
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Entry
CMN_00250 CDS
T02530
Name
(GenBank) pectinesterase
Organism
cmc
Clavibacter nebraskensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
fn3
Motif
Other DBs
NCBI-ProteinID:
CCE74222
UniProt:
M5BCL6
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All DBs
Position
complement(231935..236038)
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AA seq
1367 aa
AA seq
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MSGSTLTATTYTDVPPAGATAYYQVTAVNTVGSSAPATASVAIPADTTAPTTPSSPKAVV
VANGGGMTISWKANTEADLAGYIVFKRGSDEVYRQLLPTAGTSAYATTTFTDAAATEGTT
TYYRIRAVDRAGNTSAYVAVTGKNPNVAPAAPSSLTVKPSAKAGLDLAWTAPKDTDVAGY
TVSRSTTSNGTFVQLSTITTAAAGSPPRFTDTSAPQGVPVFYRVTARDLVGNVSKVSSTV
SGTSTTAPVAIPVEYTVLTVGVGKQFPTIAAAVASIPKTALANHRIDIDPGTYRESFSLD
RSNVMLHGLGADPSQVVISAAQASGSADPDEPEETLGTAGSAVIRVTGTDVTLENLTVEN
AFDEKAHPEITSAQAVALRVEGDRFVARGVRLLGNQDTLLADTPKPTTRIRQYYVDSYIE
GDVDYLFGAATAVFDRVTFRSLDRGKANNGYLTAASTDEGSKYGFLITGSKIVSDAADGT
VNLGRPWHPSADPKALGSVVIKDTWLPSAIDTAAPWDDMSSTNSSGVKVPFAWQDARFAE
SQNIGPGATVNANRPQMTAKDAANATPEKYLAGKDGWNPVVAASAAVPVVPSGLVAAADS
SVVHLTWADDTSASVTGWTVYRADATGAFARIASTDSPAYSDTTVVNGAAYRYVLTADSR
TGVSSAPSAAVEVTVQAAAIVVDITVDPRAEANGTTVFPTLTAALAAAPAGTATDPTVIA
LAAGRYAEYATIAKPYTVLVGATGTAQDVVITGNRAAGTPTGTTTDGVADTYGTSGSATL
VITGNNVALRDLTVENAYVEGTYANGQAVALRTTGDRLVYDGVRLLGNQDTLYANSPSAA
IPARSYFHDSWIEGDVDFVFGRGTVVIDRSTLNALDHGTSPNGAVTAASTDRGNPYGFLI
TGSRIIGTAPDGSQNLGRPWQPGKKQADGTSIADPDANAQVVVRDTWLGPVVSAKAWTDM
VNSGVTTTWQSARFAEYANSGPGASTSTSTDRAQLTDAQAAASTSAAYLARSDGWNPVAP
LAEDAAPAAVAGLVATSAEKQVGLSWAPGAESDVVGYRVYRATGSDALVADAAHLVAEVQ
KPVHLDRGLVNGTAYRYLVVAVDRAGNASEPSDVVTGTPAVTPLVADITVAADGSGDVTT
LQAALAAIPAGTAAARKVILVEPGTYREVVSSSKANVVIAGTTGDPRDVVITYDNANGTA
KGATTCPAVVAATCGTAGSATATLSGAGVEVRDLTIENAFSSAAHPEIGPNNTQAVALRA
LGDRQTYRHVRLLGAQDTLNADASGTITADGTGYPHQYYVDSYIAGNVDFVFGRAAAVFD
RVTIHATTRNGGTVFAPSTASKSRGYLVVDSRITADNDAPTMALGRP
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggatcgaccctcaccgccacgacgtacacggacgtgccgcccgccggcgcgacc
gcgtactaccaggtgaccgcggtcaacaccgtcggatcctcggcccccgccaccgcgtcc
gtcgcgatccccgccgacacgacggcccccacgacgccgtcgagcccgaaggccgtcgtg
gtcgcgaacggcggcggcatgacgatctcgtggaaggcgaacacggaggccgacctggcc
ggctacatcgtgttcaagcgcgggtccgacgaggtctaccgccagctcctcccgaccgcc
ggcacgtctgcgtacgcgacgacgaccttcacggacgccgccgcgaccgagggcaccacg
acctactaccggatccgcgcggtcgaccgcgcgggcaacacgtccgcgtacgtggccgtc
accggcaagaacccgaacgtggccccggccgcgccctcctcgctcacggtgaagccgagc
gcgaaggccggcctcgacctcgcctggaccgcgccgaaggacaccgacgtcgcgggctac
accgtctcgcgcagcaccacgagcaacggcaccttcgtgcagctctccaccatcacgacc
gcggccgcgggatccccgccccgcttcaccgacacgagcgcgccccagggcgtccccgtc
ttctaccgcgtgaccgcgcgcgacctcgtgggcaacgtctccaaggtctcgagcaccgtc
tccggcacctccaccaccgcgcccgtcgcgatccccgtcgagtacacggtgctcacggtc
ggcgtcggcaagcagttcccgaccatcgccgcggcggtcgcctcgatcccgaagaccgcg
ctcgcgaaccaccgcatcgacatcgacccgggcacgtaccgcgagtcgttcagcctcgac
cgctcgaacgtgatgctgcacggcctcggcgccgacccgtcgcaggtcgtcatctcggcg
gcgcaggccagcggatccgccgaccccgacgagcccgaggagaccctcggcacggcgggc
agcgcggtgatccgcgtgaccggcaccgacgtgaccctcgagaacctgaccgtcgagaac
gcgttcgacgagaaggcgcaccccgagatcacgagcgcgcaggccgtcgcgctccgcgtc
gagggcgaccggttcgtcgcccgcggcgtccgcctcctcggcaaccaggacaccctgctc
gccgacaccccgaagcccacgacccgcatccgtcagtactacgtggacagctacatcgag
ggcgacgtggactacctgttcggcgccgcgaccgcggtgttcgaccgggtgaccttccgc
tcgctcgaccgcggcaaggcgaacaacggctacctcacggcggccagcaccgacgagggc
agcaagtacggcttcctcatcacgggcagcaagatcgtgagcgacgcggccgacggcacc
gtcaacctcggccgcccgtggcacccgagcgcggacccgaaggccctcggctccgtcgtg
atcaaggacacctggctcccctccgcgatcgacaccgcggccccgtgggacgacatgtcc
tccacgaactcctccggcgtgaaggtccccttcgcctggcaggacgcgcgcttcgccgag
tcgcagaacatcggcccgggcgcgaccgtgaacgcgaaccgcccgcagatgaccgccaag
gacgccgccaacgcgacgccggagaagtacctcgcgggcaaggacggctggaaccccgtc
gtcgccgcgtccgccgccgtgccggtcgtgccctctggtctggtggccgccgccgactcg
agcgtcgtgcacctcacctgggcggacgacacctcggcgagcgtcaccggatggaccgtc
taccgcgcggacgccaccggcgccttcgcgaggatcgcctccaccgactcccccgcgtac
agcgacaccaccgtcgtgaacggcgcggcctaccgctacgtcctcacggccgactcccgc
acgggcgtctcctccgcgccgagcgccgccgtcgaggtgaccgtgcaggccgcggccatc
gtcgtcgacatcacggtggatccgcgggccgaggcgaacggcaccaccgtcttcccgacg
ctcaccgccgccctcgccgccgcgcccgccggcaccgcgaccgaccccacggtcatcgcg
ctcgccgccggccgctacgccgagtacgccaccatcgcgaagccgtacacggtgctcgtg
ggcgccaccggcaccgcgcaggacgtcgtgatcaccgggaaccgcgccgcgggcacgccc
accggcacgaccaccgacggggtcgccgacacctatggcacctcgggcagcgcgaccctc
gtgatcacggggaacaacgtcgcgctccgcgacctcacggtcgagaacgcctacgtcgag
ggcacctacgccaacggccaggccgtcgcgctccgcaccacgggcgaccggctcgtctac
gacggcgtgcgcctcctcggcaaccaggacacgctctacgccaacagccccagcgccgcg
atcccggcgcgctcgtacttccacgacagctggatcgagggcgacgtcgacttcgtcttc
gggcgcggcaccgtggtcatcgaccgcagcacgctgaacgcgctcgaccacggcaccagc
ccgaacggcgccgtcaccgcggcgagcaccgaccgcggcaacccgtacggcttcctcatc
accggcagccggatcatcggcaccgcgcccgacggctcgcagaacctcggccgcccctgg
cagccgggcaagaagcaggccgacggcacctccatcgccgacccggatgcgaacgcgcag
gtcgtcgtgcgcgacacctggctcggcccggtcgtcagcgcgaaggcgtggaccgacatg
gtcaacagcggcgtgacgacgacgtggcagtccgcgcgcttcgccgagtacgcgaacagc
ggcccgggcgcgagcacgagcacgagcaccgaccgggcgcagctgacggacgcgcaggcg
gccgcgagcacctcggccgcctacctcgcccgatccgacggctggaacccagtcgccccg
ctcgccgaggacgccgcccccgcggccgtcgccggcctcgtcgcgacctccgcggagaag
caggtcggcctctcctgggcgcccggcgcggagagcgacgtcgtggggtaccgcgtgtac
cgcgcgacgggatccgacgccctcgtcgccgacgccgcgcacctcgtggccgaggtccag
aagcccgtccacctcgaccgcggcctcgtgaacggcacggcctaccgctacctcgtggtg
gcggtcgaccgggccggcaacgcctcggagccgtccgacgtcgtgaccggcacgcccgcg
gtgacgccgctggtcgccgacatcacggtggcggccgacggatccggcgacgtcacgacc
ctgcaggcggccctcgcggccatccccgcgggcacagcggcggcgaggaaggtgatcctg
gtggagccgggcacctaccgcgaggtcgtgtcgtcctccaaggcgaacgtcgtcatcgcg
ggcaccaccggcgacccgcgcgacgtcgtcatcacctacgacaacgcgaacggcaccgcc
aagggcgccaccacgtgcccggccgtcgtggccgccacgtgcggcaccgccggcagcgcc
accgcgaccctgtccggagccggcgtcgaggtgcgcgatctcacgatcgagaacgcgttc
tcgagcgccgcgcaccccgagatcggcccgaacaacacgcaggccgtggcgctccgcgcg
ctcggcgaccgccagacgtaccgccacgtgcgcctcctcggcgcgcaggacacgctgaac
gccgacgcgtcgggcaccatcaccgccgacggcacgggctacccgcaccagtactacgtc
gacagctacatcgcgggcaacgtcgacttcgtcttcggacgggccgccgcggtcttcgac
cgggtgacgatccacgccaccacccgcaacggcggcacggtcttcgccccgagcaccgcg
tccaagagccgcggctacctcgtggtcgacagccggatcaccgcggacaacgacgcgccc
accatggcgctcgggcgtccgtga
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