Clavibacter nebraskensis: CMN_00975
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Entry
CMN_00975 CDS
T02530
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00521
Streptomycin biosynthesis
cmc00523
Polyketide sugar unit biosynthesis
cmc00541
O-Antigen nucleotide sugar biosynthesis
cmc01100
Metabolic pathways
cmc01110
Biosynthesis of secondary metabolites
cmc01250
Biosynthesis of nucleotide sugars
Module
cmc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CMN_00975 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CMN_00975 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CMN_00975 (rmlC)
Enzymes [BR:
cmc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CMN_00975 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCE74930
UniProt:
M5B7N5
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Position
997357..997962
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AA seq
201 aa
AA seq
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MQIRELAVPDGYEITPVQRADDRGVFLEWYRFDELERVVGHRLDLRQANMSVSKRGVVRG
VHFADVPRGQAKYVKAVSGAVLDFVIDIRVGSPTFGQWDSVRLDTETHKAVYISEGLGHC
FVALTDDAAVTYLVSDVYNPGAEHGIDPLDPEVGLVFPEEAGEPLLSPKDLEAPTLAEAA
AAGLLPTWSDMRAFHDSQKAS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatccgagagctcgccgtgcccgacggctacgagatcacccccgtccagcgcgcc
gacgaccggggcgtgttcctcgagtggtaccggttcgacgagctcgagcgcgtcgtgggc
caccggctcgacctgcgccaggccaacatgagcgtctcgaagcgcggcgtcgtccgcggc
gtgcacttcgccgacgtgccgcgcggccaggccaagtacgtgaaggccgtctccggcgcc
gtgctcgacttcgtcatcgacatccgcgtcggatccccgaccttcgggcagtgggacagc
gtgcggctggacaccgagacccacaaggccgtctacatctccgaggggctcggccactgc
ttcgtcgcgctgaccgacgacgcggccgtcacctacctcgtgagcgacgtctacaacccg
ggcgccgagcacgggatcgacccgctcgaccccgaggtcggactcgtcttccccgaggag
gcgggcgagccgctcctctccccgaaggacctcgaggccccgacgctcgccgaggcggcg
gccgccgggctcctccccacctggtcggacatgcgcgccttccacgactcccagaaagcg
agctga
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