Clavibacter nebraskensis: CMN_01381
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Entry
CMN_01381 CDS
T02530
Symbol
gatB
Name
(GenBank) aspartyl-/glutamyl-tRNA amidotransferase, subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00970
Aminoacyl-tRNA biosynthesis
cmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CMN_01381 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cmc03029
]
CMN_01381 (gatB)
Enzymes [BR:
cmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CMN_01381 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CMN_01381 (gatB)
Mitochondrial biogenesis [BR:
cmc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CMN_01381 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
CCE75332
UniProt:
M5B8H3
LinkDB
All DBs
Position
1434310..1435812
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AA seq
500 aa
AA seq
DB search
MAKAELMDYDEAIEMFEPVLGFEVHVELNTRTKMFSDAPNFFGGEPNTNITPVDLGLPGS
LPVVNEQAVRYSISLGLALGCEIAPSSRFARKNYFYPDLAKNYQISQFDEPIAFRGSVEV
EMPDGRIVTVPIERAHMEEDAGKLTHVGGATGRIQGADHSLVDYNRAGVPLVEIVTDIIY
GAEAEAPELAKAYVSTIRDIVVALGISDAKMERGNLRCDANISLSPRGSGKLGTRTETKN
VNSLRSVERAIRYEIQRQAAILASGGTITQETRHWHEDTGRTSAGRPKSDADDYRYFPEP
DLLPVQPSAELIEELRAALPEAPAIRRRRLKAEWGFTDLEFQDVVNSGLLTELVDTVEAG
AAPQAARKWWTGEIARIANARGVDAATLISPAQVASVIELVEAGTLTNRLARDVIEGVID
GEGTAQEVVDARGLAVVSDDGPLIEAIDAALQAQPDVLAKIRDGKVQAAGAVIGAVMKAM
RGQADAARVRELVLERAQAS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcagagctgatggactacgacgaggccatcgagatgttcgagcccgtgctc
gggttcgaggtgcacgtggagctgaacacgcgcacgaagatgttctccgacgccccgaac
ttcttcggcggcgagcccaacaccaacatcacgcccgtggacctgggcctcccgggctcg
ctgccggtggtgaacgagcaggccgtcaggtactcgatcagcctgggtctcgcgctcggc
tgcgagatcgcgccgagctcccgcttcgcccggaagaactacttctacccggacctcgcg
aagaactaccagatcagccagttcgacgagcccatcgcgttccgcggctccgtcgaggtc
gagatgcccgacgggcgcatcgtcacggtgcccatcgagcgcgcgcacatggaggaggac
gccgggaagctcacgcacgtgggcggcgcgacgggccggatccagggcgccgaccactcg
ctggtcgactacaaccgcgccggcgtgccgctcgtggagatcgtcaccgacatcatctac
ggcgcggaggccgaggcccccgagctcgcgaaggcgtacgtgtcgaccatccgcgacatc
gtcgtggcgctcggcatctcggacgcgaagatggagcgcggcaacctgcgctgcgacgcg
aacatctcgctgagcccgcgcggatccgggaagctcggcacccgcacggagacgaagaac
gtcaactcgctccgcagcgtcgagcgcgccatccgctacgagatccagcgccaggcggcg
atcctcgcgtccggcggcacgatcacgcaggagaccaggcactggcacgaggacaccggc
cgcacctcggccggtcgcccgaagagcgacgccgacgactaccgctacttcccggagccc
gacctgctgcccgtgcagccgagcgccgagctgatcgaggagctgcgggcggccctgccc
gaggcgcccgcgatccgccgccgccggctcaaggccgagtggggcttcaccgacctcgag
ttccaggacgtcgtgaactccgggctcctcaccgagctcgtcgacacggtcgaggccggg
gccgccccgcaggcggcgcgcaagtggtggacgggcgagatcgcccgcatcgccaacgcg
cgcggcgtggacgcggcgacgctcatcagccccgcgcaggtcgcgtccgtcatcgagctg
gtcgaggccggcacgctcacgaaccgcctcgcgcgcgacgtgatcgagggcgtcatcgac
ggcgagggcacggcacaggaggtcgtggacgcccgcggcctcgcggtcgtgtccgacgac
ggcccgctcatcgaggcgatcgacgcggcgctgcaggcgcagcctgacgtgctcgcgaag
atccgcgacggcaaggtgcaggccgccggcgccgtcatcggcgccgtgatgaaggccatg
cgcggccaggcggacgcggcccgcgtccgcgagctcgtgctggagcgcgcgcaggcctcg
tga
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