Cyanidioschyzon merolae: CYME_CMD156C
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Entry
CYME_CMD156C CDS
T00175
Name
(RefSeq) coatomer protein complex, subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cme04131
]
CYME_CMD156C
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cme04147
]
CYME_CMD156C
Membrane trafficking [BR:
cme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CYME_CMD156C
Exosome [BR:
cme04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CYME_CMD156C
Exosomal proteins of bladder cancer cells
CYME_CMD156C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
COPI_C
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
16992704
NCBI-ProteinID:
XP_005535503
UniProt:
M1VAP0
LinkDB
All DBs
Position
4:complement(410511..414800)
Genome browser
AA seq
1429 aa
AA seq
DB search
MLVSFESKSSRVKGLSFHPKRPWLLASLHSGAIQLLDYRLATVIDTYHEHEGPVRGIAFH
PSQPLFVSGGDDAKIKVFHYGLRRCLFTLTGHADYIRTVQFHHELPWIVSASDDQTVRVW
NWQNRTCLAVLSGHNHYVMCASFHPAEDLVVSASLDQTIRVWDISGLGGGSANAAQAIAA
VTAAGLWGSSANANALAPGRDQGTGFGTGSAPWSALAPQSTGGGMGAPSMSGFGGSSGST
LGSGAYGGGTGGISGVIERLGGGLDVAVKFTLEGHTRGVNWVSFHPSLPLIASGADDRTI
KLWRYTESRAWEVDTLRGHVNNVSCVLFHPHLDVLVSNSEDKTIRVWDLSRRSCIAIYRR
EMDRFWILAVHPRLSAMAAGHDSGCMIFKLHRERPPFTMLENGVLVYVRDRFVRALELDT
GREWPVCMARGRQPANDTGSSWPGMSGEGTTGLSALGGSNGISAPGVLFGLSTGNAVLTP
PPRSLQYQPLDRALLLQYDADGGFAELYQLPQRIEEPRNVSGDSPDLQVEPRRVPALSSV
LLGQGRWLTLEEDALLLRDLSQGSERRIPLPATGIRFMFPATAGLVLFASRDQVHLWDWQ
RQKLLATLDAPLIRYAVWSEDRTYLALLAKHTLWIVNRQMERLALLHETMRIKSAAWDES
GVLVYTTTSHLKYCLPNGDAGIICSLKEPLYLTWVRGPAVAALDRRAQPQTLAIDPTEYT
FKLLLWRKQYDRVRQALAESRLPGKSMIGYLQQKGYLDIALWFTEETQTRFVLALSAGYL
QTALDMAGQMDDDEAWSSLAEKAMEYGQVQLAELCFQRLRNLERLLFLYVLTGNWEKLER
LYDIADAQKDIPAQLQIALVLGDPESRVQTLKKAGLDALASLLSATYEPEDATAGSYVAG
VEKLQTPLAPVDATLAQENWPLMPTSESVDAHHASEGVAAGAFDGAARQAASIAPANDLY
EASVSQHSSTGYLASDWTAAAGRLGDAMHTGDYTERSNSMTMGDADAHVANEAGFLGFAA
NAATDAADGWADTLDLELPPDAVTSPSSSQDRHAMAAGDALHPSAALDAAAAAAPAASVT
TSSLSHSLADIPVEPGPLTQEIWRAQARVPGEWVIAGEPQRALALLVEQICLADPVVLHP
VLRALHAAAWHAVPSPSCASLSLSRIDQTPCVASADETPAPAAFVMIDRLEQQMEHIFGL
VTRGAFGEADRLLLSLLWVMPFAIVRSAADDAKLRSLISTCREYRLGMRLMLEQKTCRAR
GLDSDADRARLMQLSALFTHCNLEPPHLLLALRAAMKLAYELQFDALAVRFAQRVLETEP
APELVAAANKVIALAERRRRSEQRSSTSKQEAVSRVLPLDMYDEQRIFAIDAELLVPIHD
RGAVRSCPYCTATYTSATRCVVCQLSSLDASQRTASGLIFWTQGVTSST
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtttcgtttgagtccaagtcgagcagggtaaaaggcctgtcttttcacccgaaa
cggccgtggctgctcgcatcgctgcactctggagctatccagttgcttgattatcgacta
gcaacggttattgacacttatcatgaacatgaaggcccggtgcgggggattgcgttccat
ccgagtcagccgctgttcgtttctggaggcgatgacgcgaagatcaaagttttccactac
gggctgcggcgttgtctcttcacgctgaccggccatgcggactacattcgtacggtacaa
tttcatcatgaactgccgtggatcgtatcagcttctgatgaccagactgttcgggtgtgg
aactggcaaaatcgcacgtgcttggcggtgctcagtgggcataatcactacgtgatgtgc
gcaagttttcatccagctgaggatttggtggtatctgcgtcgcttgaccagacgattcga
gtgtgggatatctccggtttgggtggtggatctgcgaacgctgcccaagctatcgcagct
gtcacggctgcaggtctctggggatcgagcgccaacgcgaatgctttggcacccggccga
gaccaaggcaccggcttcggtaccggtagtgcgccctggtctgcactagccccgcaaagt
acgggtggaggaatgggtgcgcctagcatgtcagggtttggtggctcctctggatctact
ttggggtccggtgcatatggtggcggcaccggcggaatcagtggagtgatcgagcgcctc
ggtggcgggctcgatgtcgctgtgaaatttacgctcgaaggccatacacgcggcgtgaac
tgggtcagcttccatccgagtctgccactcatcgcatcgggtgcagatgatcgtacaatc
aaactctggcggtacacggaatcacgggcctgggaggttgacaccctacgcggtcacgtg
aacaacgtgtcatgcgtgctgttccatccgcatcttgatgtgctcgtctcgaattcggaa
gataagacgattcgcgtgtgggatttgtctcggaggagctgcatagcgatctacaggcgt
gaaatggatcgattctggattctggcagtgcaccctcgtctcagtgcaatggcggcgggt
catgattccggctgcatgattttcaaactccaccgggagcggcccccgttcacaatgctg
gagaatggcgtgcttgtgtacgtgcgggatcggttcgttcgggcgctcgagctggacaca
ggtcgagagtggcccgtttgtatggcccgcggacggcagccagcgaatgatacgggatca
tcctggcccggcatgagcggtgagggcaccacgggcttgtcggcactggggggaagcaac
ggtatttccgcgcctggtgttctgttcggcctcagtacgggcaacgcggtgctgacgccg
ccaccgcgctccctccagtaccagcctctggatcgtgcgcttttactgcagtacgatgcg
gacggtggcttcgccgagctgtatcagctgccacagcgcatcgaagaaccgcgtaacgtt
tccggggactctccagatttgcaggttgaacctcgtcgcgtaccggcgctctcgtcggtt
ttactaggacaaggccgctggctcacactcgaggaagatgccttgctcctccgcgatctg
tcgcagggtagcgagcgtcggataccgctgcctgcaactggcattcgatttatgtttccg
gctacggcaggtcttgtgttgtttgcgtcccgcgatcaggtgcatctctgggactggcag
cggcagaaactgcttgcaacgctcgacgcaccgctcattcgatacgcagtttggtcggag
gatcgaacgtacctggcgttgctggcgaagcacacgctctggatcgtgaatcgacaaatg
gaacggctcgcgcttctccatgagaccatgcgtatcaagtccgcagcctgggacgaatcc
ggcgttctagtgtatacgaccacgagtcatctcaagtactgcctgccgaacggtgatgct
ggcatcatctgttctctgaaagaaccgctctacctgacgtgggtacgcggacccgctgtt
gctgcgcttgatcgccgggcgcagccgcaaactttggcgatcgatcccaccgaatacacg
ttcaagctgttgctttggcgaaagcaatatgaccgtgttcgtcaagcgcttgccgagtca
cgacttcccggcaagagcatgatcggttacctccagcaaaagggatacctcgatattgcg
ttgtggtttaccgaagaaacacagacgcgtttcgtgctcgcgctcagtgctggctatctg
cagacagcgctcgacatggcgggccagatggacgatgacgaagcctggtcgagtttagcg
gaaaaggcaatggaatatgggcaggttcagcttgcggagctctgttttcagcgtcttcgg
aatctggagcgtttgctgtttctatacgttctgacgggcaactgggagaagctggaacgt
ctctatgacatcgccgatgcccaaaaggatatccccgcacagctgcagatcgcgttggtc
ctcggcgaccccgaaagtcgtgtgcagacgctcaaaaaggctggccttgatgccttagct
tccctactgagcgcaacgtacgaacctgaagatgcaacggcagggtcatacgttgcgggt
gtcgagaagttacagacaccgctcgccccggtggacgccacgctggcgcaggagaattgg
cccctgatgccaacgtcggagtccgtcgacgcgcatcatgcatcggaaggcgtcgcggca
ggcgctttcgacggtgctgcgcggcaggcggcgagcatcgcgccggctaatgacctctac
gaggcatccgtgagtcagcattcgagcacggggtatcttgcgagtgactggacggcagct
gctggccgtttgggtgacgcgatgcacaccggtgactacacagagaggtcgaacagcatg
acaatgggcgacgcggatgcgcatgtcgcaaatgaggccgggttcctgggttttgctgcg
aacgctgcaacggatgctgctgacggctgggcagatacattggacctggaactacctcca
gacgcagtgacgtcgccgagcagctcccaagaccggcatgcgatggcggctggcgacgct
ttgcatccgagtgctgcattggatgctgcagcagcagctgctcctgctgcaagcgtcacc
acatcgagtttatcacattcgctggccgatattcccgtggagcccggtccgttaacgcag
gagatttggcgtgcccaggcccgggtacccggcgaatgggtgattgcgggagagcctcag
cgggcgctggcactgcttgtagagcagatatgtctggcggatcccgtggtacttcatccg
gttctgagggcgcttcatgcggcggcgtggcacgcggtgccgtccccgtcttgtgcttct
ttgagcttgtcgcgaatcgatcagacgccttgcgttgcgagcgcggatgagacaccagcc
ccggcagcattcgtgatgatcgatcgactcgaacagcagatggagcacattttcggtctg
gtaacacgcggggcctttggcgaagcggatcgcctgctgctatcactcctctgggttatg
ccgtttgcgattgttcggagcgctgcggacgacgcaaaacttcgctcgctgatcagcact
tgtcgagaatatcgtctcggcatgcgtctaatgctggaacagaaaacttgtcgagctcgc
ggtctcgacagcgacgcagatcgagcgcgactcatgcagctgtctgcactattcacgcac
tgcaacctggaaccgccgcatttgctgttggcgcttcgtgcggccatgaagctcgcctac
gagttgcagtttgatgcacttgctgtgcgctttgcgcaacgtgtgctagagacggaacca
gcgccggaacttgtcgctgccgcgaacaaagtgatcgccttagcggaacgtcgacggcga
agcgaacaacgctccagtacctcgaaacaagaagcagtgtcacgtgtgctaccgcttgac
atgtacgatgagcagcgcatctttgccatcgatgcggagctgctggtacccatacacgat
cgcggagcagtgcgatcgtgcccgtattgtacggcaacatacacctcggcaacgcgttgt
gtcgtctgccaactatcgagcctggatgcctcgcagcgtacggcatcgggtttgattttt
tggacacaaggcgtgacgtccagtacttga
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integrated database retrieval system
