Cyanidioschyzon merolae: CYME_CMH246C
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Entry
CYME_CMH246C CDS
T00175
Name
(RefSeq) probable DNA repair protein SPR18
KO
K22803
structural maintenance of chromosomes protein 5
Organism
cme
Cyanidioschyzon merolae
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cme03400
]
CYME_CMH246C
DNA repair and recombination proteins [BR:
cme03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CYME_CMH246C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
16993566
NCBI-ProteinID:
XP_005536180
UniProt:
M1V7M1
LinkDB
All DBs
Position
8:complement(630226..634494)
Genome browser
AA seq
1422 aa
AA seq
DB search
MPRVKQQKRRESSLRRGIDAESPTAASDDPFAFCSDSESDHEPALVATSPSRKRTHIRKE
PERHAAHKRVDVYYGSRADLTSAADSDRQATAKRKQRPTSAAPETIQEGHKHGTARSGRS
TAEHTSKTQVATGAECSQAEAQVSPRTRETRLNVRKRGNAAKSSTRAQVPEEELEQFFRG
ASSTYGRSTVPAAATAEAAVVRVASRAQRDSSESPSKRLSPESIPQCSRTASTRTLPPAL
NTFTGPESQRALTAASSSDDESDVHDEKAHSEASALPAALGRCSTAETLTGPDQVADTAG
KVSPAPALRVATGLVTSSGPSRAAGSALHGSAALSQPGPADAATATTAMRPRLHRDKRHI
QLDPAATVTESCHSGQETAGWRRGQLLRLRLHHFLAFDEMEIRPGRTLNLVVGPNGSGKS
SIVAGICIGLGGKLELLSRAPVLSSYIKHGCERARIDVELFDPDASGTRRRISRSFSRDG
RGGFTLDGESVSKRTIEELCAHYDIQLDNICTFLPQERVPELVECTPTELLRQTIRAVFG
SAALEAFEALAEQQANGAAWASRLAAHEARLADWIRQNEALEAQLRFYEERQALLQEIEQ
MRLYRPYCIYEICRQEAIAARDAFKTVDRVYRAKCADWERLCAPLRAMQQEWLQLQHERD
AQKQVLSDLSVAARQQQADMNEALARFDEANDALARLAQDLAERKRNYEGCQHKVERLET
ELAALMQRTGTEAELEKRIEEKRRERQQIAERLLSVSDAMRNLEQQHLAPLQSQFQELQN
QRDRLRNIRQQRLALIQRRNPHSQVIECYQFITAQREAGRFRGQVWGPLPLEVRTSDAFY
SDVLETVLGGWLEVVFVFEHPEDERIVFQESQRNHWRVNTIALVRPDVSLAPPAPVASVE
PLGVRAFLSDCFEAPENLKKALADAVPIHLIAVADAEAGRHVRELALKHRVYAVFTPQNG
YRSRLSRYNAESVSIRVEALQRRRAGLYAMPDERQVAQLDDQLAQLDAQRAHWRAQAAAL
AEQEKALRIQERSLQQELASLLEDRKQLRHAQQRLTMQRSLMETIARDLQNTAKDDEKRK
RWQRAASEAAHHYAQLVIAGAEQLAQHQAAIAALVERTWLMLDKQRLLSAGERSLATAAL
EMQTLLQQRDDARQRVDEAKSRMRQKRQEAEAVAPLTAALQQQLRAWQFPTSVEELDERI
ARAQARADALTSVSAEVVQVYERRQQQIEALRQQLERERAQHATALRELHQESQRWLRDL
RTLVRSISLAFSRLLQQLHCAGQVDLLEDEELRRLALRIQVQFRANEPLRTLSAQHHSGG
EKMVATMLFLLAMQRHARPPIRVIDEINQGMDPHNERAIIQMMMEEAQVSDDASSQFPQT
LLVSPKLLLDLKYNQQLVMHCVWNGPHMRLQADGDSSESTSA
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggtaaagcaacaaaagaggcgagaaagcagcctccgacggggcatcgacgct
gagtcacccactgcggcaagcgatgatccctttgccttctgcagtgattcggagagcgat
cacgagcccgctcttgtggcgacctcaccgtcccgaaagcgaacgcacatccgaaaagaa
cctgaaaggcatgcggcccataagagggtagatgtttactacggcagtcgtgccgacctg
acgtccgcggcggactcggacaggcaagctactgcgaaacgcaagcagcgacccacatcc
gccgcccctgaaacgatacaagaaggccacaagcacggtaccgctcgaagcgggcgctcg
acggcagagcatacatcgaaaacgcaagtcgcaacaggcgcggaatgctcccaggcggaa
gcacaggtatcaccacgaacacgcgagacacgtcttaacgttcggaagcgaggtaatgcg
gcaaagtcatcgacacgtgcacaagtgcccgaagaagagcttgaacaatttttcaggggc
gcatcgagcacatacggtagatctactgttcccgccgctgcaacagcagaagcagcagta
gtgcgggtagcttcgcgcgcacagcgcgacagcagcgagtcgccctcgaagcgactttca
ccggagtcgataccccagtgctcccgaacggccagcacacgcacgttaccgcccgcactg
aacacgttcaccgggcccgagagccaacgagcgcttactgctgcctcaagcagcgacgat
gagagcgacgttcatgacgagaaagcgcacagcgaggcgagcgcgctgcccgcggctctc
ggacgctgctctactgcagagactctgactggcccggatcaggtcgcggacacagcaggg
aaggtatcgccagctcctgcgctacgtgttgccactggattggtcacatccagtggtcca
tccagagcagcaggcagtgctctacatggaagcgctgcgctatcgcaacctggccccgcg
gatgccgcgacggcgacgacagcaatgcggccgcgactacatcgcgataagcgccatatt
caactggaccctgctgcaacagtgaccgaatcgtgtcactccgggcaagagacagcgggc
tggcgtcgaggtcaactcctgcgtctccgactgcaccattttctcgcgttcgatgaaatg
gagattaggcctgggaggaccctaaatctcgtggtgggccccaatggcagcggcaagtct
tcgattgtagcaggaatatgcatcggacttggaggcaagctggagctcttgtcgagagca
ccagtgctcagctcctacatcaagcacggctgcgaacgagcgcgcattgacgtagaactc
ttcgacccggatgccagtggcacgcgacggcgcatatcacgctcctttagtcgcgatggt
cgtggcggattcaccctcgacggggagtcggtctcgaaacgcaccattgaggagctctgt
gcgcactacgatatccagctagacaatatctgcacgtttctgccacaggagcgcgtgccg
gagctggtcgagtgcacacccacggagcttttgcggcaaacgattcgagcagtgttcggc
agtgcagcgctcgaggcattcgaggcgcttgctgagcagcaagcgaatggtgcagcctgg
gctagtcgtcttgccgcgcatgaagctcgacttgcagactggattcgccaaaatgaggcg
ctcgaggcacagcttcgcttttacgaggagcgacaggcgcttctgcaagagatcgaacag
atgcgcctctaccgaccgtactgcatctatgagatctgccgacaagaggcaattgcggca
agggacgcgttcaaaaccgtagatcgtgtgtaccgggccaaatgtgcagactgggagcgt
ctctgtgcgcctctgcgggccatgcagcaggagtggctgcaactgcaacacgagcgtgat
gcccagaaacaagttctgagtgacctatcggttgcagctcggcaacagcaggccgatatg
aacgaggcgctagcgcgtttcgatgaggccaatgatgcgctcgcacgccttgcccaggac
cttgccgagcgcaagcgcaactatgaaggatgccagcacaaggtcgagcggttggaaacg
gagcttgcagcgctcatgcaacgtactgggacagaagcggaactcgagaagcgcatcgaa
gaaaagcgacgggagcgacagcaaatcgccgaacgcttgctctcggtaagtgatgcaatg
cgcaacctggaacagcagcatctggctccgttgcaaagtcagttccaagagcttcagaac
caacgcgatcgcctgcgtaacattcggcagcagagactcgcgctgatacagcgtcggaat
ccgcacagtcaagttatcgagtgttaccagtttataactgcacaacgagaagctggacgc
tttcgaggtcaagtctggggtccgttgccgctggaagttcgcaccagcgacgctttctat
agcgatgtgctggaaacggtactagggggctggctggaagtggtgttcgttttcgagcat
cccgaggatgaacgaatcgtgtttcaagagtcccagcgaaaccactggcgcgtcaatacg
atagcgttggtgcgtcccgatgtttcgttagctccaccggccccggtggcgagcgtggag
ccccttggcgtacgtgcctttctcagcgattgtttcgaagcaccggaaaacttgaaaaaa
gcactcgccgacgctgtaccaattcatttgattgcagtcgctgatgccgaggctggtcga
catgttcgcgagctcgcgctcaagcatcgcgtgtatgcggtcttcacgccgcagaacggc
taccggagtcgtctatcgcgctacaacgcggaatcagtttcgattcgggtagaggcgctc
caacggcgacgagctggcctctacgcgatgcctgatgaacgacaagtggcgcagctggac
gaccaactcgcacaattagatgcccagcgggcacattggcgagcccaagccgccgctcta
gccgagcaagagaaagcgctacgcattcaggagcgaagtctacagcaggagctcgcctcc
ctgctcgaggatcggaaacaactccgccacgcgcaacaacgactgaccatgcagcgctca
ctcatggagacaattgcgcgcgacttgcagaacacagcaaaggacgacgagaaacgaaaa
cggtggcagcgagctgcctcggaagcagcgcaccattatgcgcaactggtcattgctggt
gccgagcaacttgcacagcatcaggccgccatcgctgccctcgttgagcgaacctggctc
atgctcgataagcaacggctgctgagcgcaggagagcgttcacttgccacagctgcactg
gaaatgcagaccctcctacaacaacgtgacgatgcacgtcagcgcgtcgatgaagccaaa
agcaggatgcgccagaaacgccaggaggccgaagccgtcgcaccgcttacagcagcgctg
caacagcagctccgtgcgtggcagttcccgaccagcgtcgaggagctcgatgaacgcatc
gctcgggcacaggctcgggccgatgccctcaccagcgtttcagcggaagtcgtccaggtg
tatgagcgacggcagcaacagatcgaagcgcttcgccagcaactagaacgagaacgtgcg
cagcatgccactgcgcttcgtgagctccaccaggaatcccagcgatggctacgtgatctc
cgtaccctggttcgttccatatcgcttgctttcagccggcttttgcagcaactgcactgt
gcgggacaagtggacctgcttgaggacgaggagcttcggcgcctcgcgttgcggattcag
gtccagtttcgggcgaatgaaccgcttcgaacgctctccgcacagcatcattcgggcggg
gagaaaatggtcgccaccatgctgttcttgttggccatgcagcgtcatgcacgtcctccg
atacgcgtgatcgatgaaatcaaccaagggatggaccctcacaatgaacgggcgatcatc
cagatgatgatggaagaggcacaagtctcggacgacgcctcgtctcagtttccgcagacg
ctgctcgtttctcccaagttgctgctggatttgaagtataaccagcagctggtgatgcat
tgtgtatggaacggtccgcatatgcggttgcaggccgatggtgatagctccgagtccacg
tcagcgtag
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