Clavibacter michiganensis subsp. michiganensis: CMM_2073
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Entry
CMM_2073 CDS
T00529
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CMM_2073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_2073
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CMM_2073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
DUF5321
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
CAN02136
UniProt:
A5CSR5
LinkDB
All DBs
Position
complement(2337014..2338063)
Genome browser
AA seq
349 aa
AA seq
DB search
MRAIWKGAVTFGLVNVPVKVYSATQDHDVPLHQVHDADGGRIRYQRRCEVCGKVVDYAHI
DKAFDDGDRTVVITEEDLSSLPEEKSREIDVVEFVPSDQIDPVMLDRSYFLEPDSSSPKS
YALLRRTLQETDRTAIVHVTLRQRTRLAALRVRGDVLMLQTLLWDDEVREADFPSLDAAP
KVSPRELKMSAQLVEGFAEDFDPSKFGDEYQEQLKTLIDAKLAQGDSLDTDATFGEGDAD
EEDAGGEVLDLMDALKRSIERSRGGASGAKGKAAPAKRTAAKEKASGAEASTATKGAAKK
STAKSSGAESTTEKKASAKKSTAKKASAKKTTTKKGGAAKDQAAERKSA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagagccatctggaagggcgccgtcaccttcggcctcgtcaacgtgcccgtgaaggtc
tacagcgcgacgcaggaccacgacgtgccgctgcaccaggtgcacgacgccgacggcggg
cggatccggtaccagcggcgctgcgaggtgtgcggcaaggtcgtcgactacgcccacatc
gacaaggcgttcgacgacggcgaccgcaccgtggtgatcaccgaggaggacctctcgagc
ctccccgaggagaagagccgcgagatcgacgtcgtcgagttcgtgccgagcgaccagatc
gacccggtgatgctcgaccgcagctacttcctcgagcccgactcctcgagccccaagtcg
tacgcgctgctgcgtcgcacgctgcaggagaccgaccgcacggcgatcgtgcacgtgacc
ctccgccagcggacccggctcgcggcgctccgcgtgcgcggcgacgtgctcatgctgcag
acgctgctgtgggacgacgaggtgcgcgaggccgacttcccgtcgctcgatgccgcgccc
aaggtctcgccgcgggagctgaagatgtcggcgcagctcgtcgagggcttcgcggaggac
ttcgacccgtcgaagttcggtgacgagtaccaggagcagctgaagacgctcatcgacgcg
aagctcgcgcagggcgactcgctcgacaccgacgcgacgttcggggagggcgacgcggac
gaggaggacgcgggcggcgaggtgctcgacctcatggacgcgctgaagcggagcatcgag
cggagccggggcggggcatccggggcgaaggggaaggcggcgccggcgaagaggacggcc
gccaaggagaaggcgagcggggccgaggcgagcaccgcgacgaagggcgccgcgaagaag
tcgacggcgaagtcctcgggcgcggagtcgacgaccgagaagaaggcgagcgcgaagaag
tcgacggcgaagaaggcgagcgcgaagaagaccaccacgaagaagggcggcgccgcgaag
gatcaggccgccgagaggaagagcgcctag
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