Caldinitratiruptor microaerophilus: caldi_20740
Help
Entry
caldi_20740 CDS
T08566
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmic03019
]
caldi_20740
03009 Ribosome biogenesis [BR:
cmic03009
]
caldi_20740
04131 Membrane trafficking [BR:
cmic04131
]
caldi_20740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmic04147
]
caldi_20740
Messenger RNA biogenesis [BR:
cmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
caldi_20740
Ribosome biogenesis [BR:
cmic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
caldi_20740
Membrane trafficking [BR:
cmic04131
]
SNARE
SNARE associated proteins
Others
caldi_20740
Autophagy
Aggrephagy
Other aggrephagy associated proteins
caldi_20740
Exosome [BR:
cmic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
caldi_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_33
AAA_5
CDC48_N
AAA_28
RuvB_N
AAA_14
AAA_18
TIP49
IstB_IS21
AAA_17
AAA_2
Zeta_toxin
Mg_chelatase
nSTAND3
Sigma54_activ_2
RNA_helicase
AAA_24
AAA_7
AAA_25
Rad17
ABC_tran
Parvo_NS1
CDC48_2
Sigma54_activat
Molydop_binding
AFG1_ATPase
PhoH
AAA_11
SLFN-g3_helicase
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BDG60984
UniProt:
A0AA35CM24
LinkDB
All DBs
Position
complement(2113408..2115525)
Genome browser
AA seq
705 aa
AA seq
DB search
MDAAVGLASEHRRSSQPVFRVMDAVVGGDVQGAVYLHPADMKVLGIEPGDTVRLTGRQSA
MAVAMFMPTNVVGERVLLLGPLGRQNAGVGIGEGVRLEKVQCSKAVTVRLARLVPAGTRP
APQDTARLVESLSGVPVLKGNVLADPRQHPAVPAFRVAATVPDGPVRIVRTTHITFVDAE
IVSQRPTGVSYRDVGGLDHELARIREIVEWPLRYPRLFERLGVQPPKGVLLYGPPGTGKT
LVARALAAESQAYFIHVNGPEVVRKLYGESEARLREIFDEAEHRAPSIIFFDEIDAIAPR
RAEVPGEVEKRLVAQFLALLDGFQGRGQVVVIGATNLLENIDPALRRPGRFDREIEIGVP
NRDGRLQILQIHTRRLPLAPDVNLAELADRTPGFVGADLAALAQEAAMAAMRRYLSSHGP
LVPGDGPSFDDLVVRHEDFLAALREVEPSATREVALERPALGWADVGGLASVKRMLQPWL
RREAPAPGRGILLVGPPGCGKTYVARAFAGEAGLPLLEVEAPALYSKWQGESERAVAELF
ARARRAAPCVLFFDDVDAIAARRTGQETGSQHRLLAQLLREIDRLAEFPEVVLVAATSRP
ELVDPAVLRPGRFDYCVPFPPLTHEDLREVYEVHTRDLPLEGVDLGELARRSCGLSPAAI
AAVCRRARSAVAPDPGPARRRAVGMGAFLAALDGLQLHPASRGAG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccgctgtaggcctggcatccgagcaccggcgctcctcgcagccggtcttccgg
gtgatggacgccgtcgtgggcggggatgtccagggcgcggtctacctgcacccggcagac
atgaaggtgctggggatcgagcccggggacacggtgcgcctgaccggccggcagtcggcc
atggccgtcgccatgttcatgcccaccaacgtggtcggcgagcgggtcctgctgctcggg
ccgcttggtcggcagaacgccggggtcgggatcggcgagggcgtccgcctcgagaaggtc
cagtgttcgaaggcggtgaccgtccggctggcgcggctggtgcccgccggcacccgcccg
gctccgcaggacacggcccggctggtcgagtccctgagcggcgtccccgtcctgaagggg
aacgtcctcgccgacccgcggcagcacccggctgtcccggccttccgcgtcgccgccacc
gttccggacggcccggtgcggatcgtccgcaccacgcacatcaccttcgtggacgccgag
atcgtttcccagcggccgaccggcgtctcgtaccgggacgtggggggcctggaccacgag
ctcgcccgcatccgggagatcgtcgagtggccgctgcggtatccccgcctcttcgagcgg
ctgggggtgcagcccccgaagggcgtgctcctctacgggccgcccggcaccgggaagacc
ctcgtggcccgtgccctcgccgccgagagccaggcctacttcatccacgtcaacggcccc
gaggtggtccgcaagctgtacggcgagagcgaggcccggctgcgggagatcttcgacgag
gccgagcaccgcgcccccagcatcatcttcttcgacgagatcgacgccatcgccccgcgg
cgcgcggaggtgccgggcgaggtcgagaagcggctggtcgcccagttcctcgccctcctg
gacggcttccagggccggggtcaggtcgtggtgatcggcgccacgaacctcctggagaac
atcgacccggcgctccgccggcccggccgcttcgaccgggagatcgagatcggggtgccc
aaccgggacgggcggctgcagatcctccagatccacacccgccgcctgccgctcgccccc
gacgtgaacctggctgagctcgccgaccgcacacccggcttcgtcggagccgacctggcg
gcgctcgcccaggaggcggccatggcggccatgcggcggtacctctccagccacgggccg
ctggtgccgggggacggcccctccttcgacgacctcgtggtccgccacgaggacttcctc
gccgcgctgcgggaggtggagccgagcgcgacgcgggaggtggccctcgagcggcccgcc
ctcggctgggccgacgtgggcggcctggcgtccgtcaagcgcatgctccagccgtggctg
cgccgggaggcgccggcgccgggacgggggatcctcctcgtcggcccgccgggttgcggc
aagacctacgtcgcccgggcgttcgccggggaggccggcctgccgctcctggaggtcgag
gcgcctgccctgtactcgaagtggcagggcgagtccgagcgggccgtggccgagctcttc
gcccgggcccggcgtgccgccccctgcgtcctgttcttcgacgacgtcgacgcgatcgcc
gcgcggcggaccggccaggaaaccgggtcccagcaccggctcctggcccagctgctgcgg
gagatcgaccgcctggcggagttcccggaggtcgtgctggtggccgccaccagccggccc
gaactcgtggacccggcggtcctccggcccggccggttcgactactgcgtgccgttcccc
ccgctgacccacgaggacctgcgtgaagtgtacgaggtgcacactcgcgacctgcccctc
gaaggcgtcgacctgggcgaactcgcccggcggtcctgtggcctcagccccgccgccatc
gcggcggtgtgccggcgggcgcggagcgccgtggcaccggatcccggcccggcccggcgt
cgtgcggtcgggatgggggccttcctcgccgccctggacggactgcagctccacccggcc
tcgaggggggccggctag
DBGET
integrated database retrieval system
