Catenibacterium mitsuokai: NQ499_04070
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Entry
NQ499_04070 CDS
T08440
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cmit
Catenibacterium mitsuokai
Brite
KEGG Orthology (KO) [BR:
cmit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmit03009
]
NQ499_04070
Enzymes [BR:
cmit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NQ499_04070
Ribosome biogenesis [BR:
cmit03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQ499_04070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
S1_2
ThiS
FHA
Motif
Other DBs
NCBI-ProteinID:
UWO54012
LinkDB
All DBs
Position
806775..807743
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AA seq
322 aa
AA seq
DB search
MKKLVIDQYDDHQRIDKYLKKVLVQAPSSLIYKMLRKKDVKVNGKRVKENYILHSGDEVE
LFLYEDKFKEYTKPLTIYELPITFKVVYEDAHILIVDKPAGLLVHEDINESVNTLSNQVL
TYLHQKGEYDPEKNISFTPGPVHRLDRNTSGLVIFGKDMRALQDLNTMMKTRQGIEKKYL
TIAMGHMKDATLSGYVKKNEDEGKMYLVKKDTPGALSMKTIVHVLKRCSTCSLVEVQLIT
GRTHQIRIHLSATGHPVMGDSKYGDFEWNKEVKKKFHLNHQFLHAYRLTFVNPIGSMSYL
KGKTVTSQLPEQLEKIQKELFS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattagtaatcgatcaatatgatgatcatcaaagaatagataaatatctcaag
aaagtgctcgtccaggcaccttcttcacttatatataaaatgttaagaaaaaaagatgtt
aaagtaaatggcaaaagagtaaaggaaaactatattcttcattcgggagatgaggtggaa
ctattcttatatgaagataaattcaaggaatacacaaagcctttaacaatttatgagtta
cctattacttttaaagttgtttatgaagatgcacatattcttattgtagataaacctgcc
ggtttacttgttcatgaagatattaatgaatcagtgaatacattatctaaccaggtactt
acttatttacatcagaagggtgaatatgatccagaaaagaatatcagctttacaccaggt
ccagtgcatcgcttagaccgtaatacaagtggacttgtgatctttggtaaagatatgcga
gcacttcaggatttaaatacaatgatgaaaacaagacaaggcattgaaaagaagtatctc
actattgcaatgggacatatgaaggatgccacattatcaggatatgtcaaaaagaatgaa
gatgaaggaaagatgtatttagtaaagaaagatacaccgggggctttatctatgaaaaca
atagtgcatgtcttaaaaagatgttctacttgctctttagtagaagtacagctcatcacc
ggccgtacacatcagattcgtatccatttaagtgcgacaggacatccggttatgggtgat
agtaaatatggagattttgaatggaataaggaagtaaagaagaaattccatcttaatcat
caattcctccatgcttatcgattaacttttgtgaatccgataggctctatgagttactta
aaaggtaaaacggttacttcacaattaccagaacagttagaaaagatacaaaaagaactt
ttttcatag
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