Callorhinchus milii (elephant shark): 103175069
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Entry
103175069 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103175069
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103175069
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103175069
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103175069
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103175069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
CP2
Motif
Other DBs
NCBI-GeneID:
103175069
NCBI-ProteinID:
XP_007886017
UniProt:
A0A4W3GNL0
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MVPSEDNQLVPREGLFWSCRQSIFDEMKKKFSQLENAADEPRVLCIVQDTTNAKTVTERL
TLNLPASTPLKRLFDDVSSKTGYVNGTFELVWGNGLNNADQSPLDSSSETSLSSAGFEPG
KKNFLHLTDKDGEQPQLALDESGAADSSGLDDSCQERIINPQQRESTAGCGEYNSQSYSY
SPILGKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEDSEEDPVTSIPYQL
QRLFVLLQTSKKRAVETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNVAFSSVEEALQAFIQPETL
DGPNQYLCERCKKKCDARKGLKFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPAELD
MSPFIDVEEEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDVVDEGICLESNHNSEKTS
KAGNEKGSWIYELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSRITQDDIRKTY
GGSSGSRGYYSSAFASSTNAYMLIYRQKDSARNSKFLEVLEFPDHIKGLVQKEKEIEEQE
KRQREIERNTCKIKLFCMHPARQVMMENKLEVHKDRTLQEAVEAAYKIMDLEGVLPVDCC
RLVKYDEFHDYLERSYEREEDTPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKSGEVMV
KVHVVDLKTETVAPPISVRAYLNQTVTEFKQLISQTSGLSIETMRIVLERCCNDLRLLYV
PNKTLKAEGFFRSNKVFVESSETQDNRVAFTESHLWCLLDQHANTIRLCVSLPEQSPGSQ
GVKNLYLKAAGDQCNQNTFMSVKGSPAHRKSVEAILEESTEKLKNLSMQQQQQQMSCGPG
GNGDSLKSTDASDFENIESPSQKADLSASVDNRELENRIPSSDPENHFQSEERSDSDLNN
DRSTSSVDSDILSSSHSSDTLCNAENTSNPLANGLDSHSITYSRRSKANEGKKETWDTAE
EDSGTDSEYDENGKSRGATPYMYFRAEQNTCEDGSGDGQKSLLVFVDKRITLAAFKHQLE
PCVGVPSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALRKGEYRVKVYQL
LVNDPEPCKFLLDAVFAKGMTVCQSKEELLPQLREQCGLDLSIDRFRLRKKTWKNPGTIF
LDCHVYEEDINISSNWEVFLEALDDPEKMKSMSQLAVLTRQWRPSEIKLEAFREVVLESS
SVEELKEKLCSISKIPVENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICD
DGAVIFYRDKTETLMELTEEQRNELVKKESSRLQKSGHRVNYSPRKEKALKIYLDGAPSK
DSSQD
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagtgaggacaatcaactggtccccagggagggtttattttggagttgcaga
caaagtatctttgatgagatgaagaagaaattctcccagttagaaaatgcagcagatgaa
ccacgggtgctgtgtattgttcaggacaccaccaatgccaagacagttactgaacgcctc
actctgaacctcccagcatcaactccactgaaacgcctctttgatgatgtgtcatctaaa
acaggctatgtgaatggcacgttcgagttggtctggggtaatggactaaataatgcagac
cagagtcctttagattccagcagtgaaacatctcttagttctgctgggtttgaaccagga
aagaaaaactttcttcatctcacagataaagatggtgaacagcctcaacttgcattggat
gagtctggtgcagcagacagcagtggccttgatgacagctgtcaagaaaggatcattaat
cctcaacaaagggagagcacggctggctgtggggagtacaacagtcagagctattcatac
tcacccatcctggggaagtcagaaactggttatgtgggattggtaaatcaagccatgacc
tgctatttgaacagcttactgcaaacactcttcatgactcccgagttcaggaatgcactg
tacaaatgggaatttgaggattcggaggaagatcctgttactagcattccgtaccaactc
cagagactgtttgtcttactgcagacgagtaagaaaagagccgtagaaacaacggatgtg
actcggagctttggctgggatagtagtgaagcttggcaacagcacgatgtgcaagaacta
tgcagagttatgtttgatgcactggaacaaaaatggaagcaaaccgaacaggctgacctc
atcaaccagttgtaccaagggaaactgaaggactatgtgcgttgtctggagtgtggatat
gagggctggagaattgacacatacctcgatatcccactggttatcagaccatatggatcc
aatgtggcatttagtagtgtggaagaagctttacaagcgtttatccaacctgaaacccta
gatggtcccaaccaatacctttgtgagcgctgcaagaaaaaatgtgatgcacgcaagggg
ttgaagttcctgcacttcccatacctattgaccctgcagctgaagaggtttgactttgac
tacacaacaatgcacaggataaagttaaatgaccggatgactttcccagcagagcttgac
atgagtccctttatagatgtggaagaggagaaatctcctcagactgagagctgcacagac
agtggtgctgagaatgaagggagttgtcatagtgaccagatgagcaacgacttctcaaat
gatgatgttgtggatgaaggaatctgcctggaaagtaaccacaatagtgaaaagacttca
aaggcaggaaatgaaaagggttcctggatttacgagctcttttcggttatggtccattct
ggaagtgctgctggtggacattactatgcctgtataaaatcgtttagtgatggacaatgg
tacagttttaatgatcagcatgttagcaggattactcaagatgatattaggaaaacctat
ggtggctcttcagggagcagaggctattattccagtgcttttgccagctcaacaaatgca
tacatgttaatttacagacaaaaggattctgcaaggaattcaaagttcttggaggttctt
gaatttcccgatcacatcaagggactggtacagaaggagaaggaaatagaggaacaagaa
aaaaggcagcgtgaaattgaacgtaatacctgcaagatcaagttgttctgtatgcatcct
gcacggcaggtaatgatggagaacaagttggaggttcacaaggacagaactctgcaggaa
gcagtggaggcagcatacaagatcatggatttagaaggtgtacttcctgttgactgttgt
cgacttgtcaagtatgatgagttccatgattacttagaacgttcatacgagagagaagaa
gatacaccaatgggattactactgggtggagtaaagtcatcttacatgtttgacttgctg
ttagaaacaagacgacctgatcaagtttttcaaccatataaatcgggcgaagtgatggtg
aaagtgcatgtggttgacctgaagacagaaacagtggctccacccatcagtgtccgggcc
taccttaatcagacagtgacagagttcaaacagctaatttcacagacttcaggactttcc
attgagactatgcgtatagtattggagcgttgttgtaatgatctacgactactgtatgtg
cccaacaaaacactgaaggctgaaggtttcttcaggagtaataaggtatttgtggaaagt
tcggaaacgcaagacaatcgtgtggcattcactgagtcacacttatggtgcctgttggat
cagcacgccaacaccattaggctgtgcgtttccttacctgaacaatcaccaggatcccaa
ggagtaaaaaatctttacctaaaagctgcaggggatcaatgtaaccagaatacgtttatg
agtgtaaaagggtctccagctcacaggaaatcggtggaagctattttggaggagagcacc
gagaaactgaagaatctgtcaatgcagcagcaacagcagcagatgtcttgtggtccagga
ggaaatggagacagtctaaaaagcacagacgctagtgactttgaaaatattgagtcacct
tcacaaaaggcagacttgtcagcctcagttgacaacagagaactagaaaatcggattcct
tcctcagatcccgagaatcactttcagtcagaggagcgctccgattccgatttaaataac
gacaggagtacgagttcagtcgacagtgatatcttgagctccagtcacagtagtgacact
ttgtgcaatgcggaaaatacttccaaccctttggcgaatggacttgactctcacagcatt
acgtacagccgtcggtcaaaagcaaatgaaggaaagaaagaaacgtgggacacagcagag
gaggattctggcactgacagtgaatatgatgagaatgggaagagcagaggcgcaacacca
tatatgtacttcagagcagaacagaatacttgtgaagatggatcaggtgatggacaaaaa
agtttgttagtgtttgttgacaaacgaatcacactggctgcctttaaacaccagttagag
ccgtgtgttggagttccatcttcccagtttaaggtcttccgggtctatgctaacaaccaa
gagtttgagagtgttcgtctaaacgagacgctgtcatcgttctctgatgacaacaagata
actattagacttggaagagcactgcggaaaggagaataccgtgtcaaagtctaccagctg
ttagtgaatgatccagagccctgtaaatttctcctcgatgctgtgtttgctaaaggcatg
acagtgtgccagtcaaaagaggagctgctgccgcaactcagagaacaatgtgggttggat
ctcagcattgacaggtttagactccgaaagaaaacctggaaaaaccctggaaccattttt
ctggattgtcatgtttatgaggaagatatcaatatctctagtaactgggaagtgttcctt
gaagcacttgatgaccccgagaagatgaaatccatgtcacagctggctgtgctgaccaga
cagtggaggccatcggagatcaagctggaggctttccgggaggtggtcctggagagcagc
agtgttgaagagctgaaagagaagctatgttcgataagtaaaattcctgttgaaaaccta
gagtttgcaaagggcagggggacatttccttgtgacatttcagtgttggaaattcatcag
gatttagactggaatcctaaggtatcaaccttgaatgtttggccgctctacatctgtgat
gatggagctgtcattttttacagggacaagactgagaccctgatggaactcacagaagag
cagagaaacgaactggtgaagaaggaaagcagtcgcctgcaaaaatcaggtcaccgcgtg
aactactcgcctcgtaaagagaaagcactgaagatttatttggatggagcccccagtaaa
gactcgagccaggactga
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integrated database retrieval system
