Callorhinchus milii (elephant shark): 103178433
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Entry
103178433 CDS
T03088
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103178433
03015 mRNA surveillance pathway
103178433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178433
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103178433
mRNA cycle factors
P-body specific factors
103178433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
103178433
NCBI-ProteinID:
XP_042196683
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MKEDKENAKPKEKRVESRFDEKSEKKEKKEILTKVVVRRLPPSLTKEQLEEQLAPLPEHD
YFEFFSTDSSLYPHVFSRAYINFKNQEDIVLFRDQFDGYVFIDNKGQEYPAIVEFAPFQK
IPKKKSKKKDAKAGTIEDAAEQIHFSDDPEYKKFLESYNNAEEEKTAANPETLLEEIEAK
TKELAAAKKTTPLLDYVKNKQRIREEKREERRRRELEKRRIREEERRKWREEERRKRREA
EKQKKMVDKGYDKDKERSKEEAKIKLLRKPDKGDDPSSEKPKERLKKLDRERAKEDKMFM
GQGKRLDSSVKEDKGKKVEDDGREYRDRDGREYREYRERDGREYREKDGREFREKDGREY
REKDGREYREKDGREYREKDGREYREKDGREYREKDGREYREKDGREYREKDGREYREKD
GREYREKDGREYREKDGREYREYREKDGREYRDKEERERERRLKEKERQKRLEEERQKQR
ERSEADKLCRKKDEEVKKEKDQASEKARKKENLDLAASVDKSEKVKDDKKEDSLKRERIR
NKDRPTMQLYQPGARNRKGGPTNAKSGDGGVRSPDESEDQQEIEASRSFAEKESEE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaaacccaaggagaagagagtggagagcagattcgac
gagaaatctgagaagaaagaaaagaaagagatcttaactaaggttgtggtccgtcgtttg
cctcctagtctgacaaaagaacagttagaagagcagcttgccccattacctgagcatgat
tactttgaatttttttccactgattcaagtttgtatccgcatgtattttctagagcatac
atcaatttcaagaatcaagaagacatcgtccttttcagggatcagtttgatggctatgtt
ttcattgataacaaaggtcaagaatatcctgctatagtagaatttgctccatttcagaaa
attcccaaaaagaaaagcaagaagaaagatgcaaaagccggaactattgaagatgctgca
gaacaaatacacttcagcgatgatcctgaatataagaagtttttagagagttacaataat
gcagaagaggaaaagactgcagctaatccagaaacacttctggaggaaattgaagctaaa
accaaagagcttgcagctgctaagaaaaccacacctctcttagactacgtgaagaataag
cagagaataagagaagagaaaagagaagaaaggaggagacgggagctggaaaagagaaga
atcagagaagaagagaggagaaaatggagagaggaagaaaggcgaaagagaagggaagca
gagaagcaaaagaagatggtagataaaggatatgacaaagataaggagcgttcaaaggaa
gaagccaaaataaagcttttgagaaagccagacaaaggggacgatccaagttcagaaaag
ccaaaggagaggctgaagaaacttgatcgagagcgtgctaaagaggacaagatgtttatg
ggccagggcaaacgactagacagttcagtcaaagaagataaaggaaagaaggttgaagat
gacggaagagaatacagggatagggatgggagagagtatagagagtacagggagagggat
gggagagagtatagagaaaaagatgggagagagtttagggaaaaggatgggagagaatac
agggaaaaagatgggagagaatacagggaaaaagatgggagagaatacagggaaaaagat
gggagagaatacagggaaaaagatgggagagaatacagggaaaaagatgggagagagtac
agggaaaaagatggaagagagtacagggagaaggatgggagagagtacagggagaaggat
gggagagagtacagggagaaggatgggagagagtatagggaaaaggatgggagagagtat
agggagtatagggagaaggatgggagagagtacagagataaagaggaaagggaacgagag
agaagactgaaagagaaggaacggcagaaacgcctggaggaagaacggcaaaaacagagg
gagcgaagtgaagcagacaaactttgcagaaagaaagatgaagaggtcaaaaaggaaaaa
gatcaagcaagtgaaaaagccaggaaaaaggaaaacctggaccttgctgcaagtgtggac
aagtctgagaaagtaaaagatgacaagaaggaggatagcctaaagagagaacgaataaga
aacaaggaccgaccaactatgcagttatatcagcctggagcacggaaccgcaaaggtgga
ccgaccaatgcaaagtctggcgatggtggtgtgaggtcacctgatgaaagtgaggaccag
caggagattgaagcttccaggagttttgctgagaaggaaagtgaagaatga
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