Callorhinchus milii (elephant shark): 103188618
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Entry
103188618 CDS
T03088
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03250
Viral life cycle - HIV-1
cmk04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103188618 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103188618 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103188618 (samhd1)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103188618 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
SAM_Ste50p
Vac14_Fab1_bd
PDEase_I
Motif
Other DBs
NCBI-GeneID:
103188618
NCBI-ProteinID:
XP_007906851
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MSRKRPREDDNALAVPEGSAAPVRVGVSADYRDWGVEDVCRYLSSKGCGDVQQLFRDAQI
TGVCLPNLTESHLKELHVDSLGLRWKVLECICLLLQNPIVVKVFNDPIHGHIELHPLLIR
IIDTPQFQRLRYIKQLGATYFVFPGASHNRFEHSLGVGYLAGQLVKSLQDRQPELQISYR
DMLCVQIAGLCHDLGHGPFSHMFDGRFIPEARPGLNWKHEEASLKMFEYLIESNDLTEVL
EEHGLVLPEDIDFIKEQIGGPATAGQSNGECSSSPQSQVWRYIGRPESKSFLYDIVANKT
TGIDVDKWDYLARDCHHLGMKNNFDYSRCLKFSRVCDDNKRKLICTRDKEVGNLYDMFHT
RNCLHRKAYQHRVGNVIEIMIMEAMLLADKHMEIPGSGGKTYTISTAIDDMEAYTKLTDE
IFHQILYSPKAELREAQEILKNVVCRKLYKCLGETQPEAPLQIDQEERNDFAKQVAAAVP
LQAMDSSLAPEDFIVTVIEMSYGMKDQNPINKVRFYAKEDMNKAFKIRKDQVSQLLPVIF
TEQLIRVYCKKTDPQNMEAAKKHFVQWCMNKNFTKPRDGDVVAPELTPLKASWNNNRDEV
ESDSLQLPNNHKRLKPKMRPLN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaagaggccccgagaggacgataacgcgctcgcggtgccggaggggagcgcc
gccccggtccgtgtcggagtcagcgccgactacagggactggggggtggaggacgtctgc
aggtacctgagcagcaaaggctgcggagacgtgcagcagctcttcagagatgcacagata
actggagtttgtctgcccaacttgacggagtctcacttgaaggagctgcatgtggattcc
ctcggattgcggtggaaagttctcgaatgtatctgcctacttttgcagaacccgattgtg
gtcaaggtcttcaatgatcctattcacgggcacattgagcttcacccgctcctcatccga
atcatcgatacacctcagttccaacggcttcgctacatcaaacagcttggtgcaacttac
tttgtgtttcctggtgcctcgcacaacagatttgagcattccttaggggtgggttacctg
gcggggcagctagtgaaatccttacaagatcgacagccagagctacagatcagctaccgg
gacatgttgtgtgttcagatcgcagggctctgccacgacttgggtcacgggccgttttcc
cacatgtttgatggaaggttcatcccggaagctcgtccagggttgaattggaagcacgag
gaagcttcgttgaagatgtttgaatatctgatcgaatccaatgacctgacggaggttttg
gaagagcacggactggtgctcccagaggatattgactttattaaggagcagattggaggc
ccagccacagcgggccagagcaacggagagtgcagcagcagcccccagtcacaggtgtgg
aggtacatagggaggcctgaaagcaagagctttctgtatgatatcgtggctaataaaacc
actgggattgatgtggacaagtgggattaccttgccagggattgccaccatctgggaatg
aagaataattttgactatagtcgttgcctgaagttttctcgagtgtgtgatgacaataag
agaaagctcatctgcaccagagataaggaggtcggcaacttgtacgatatgtttcacact
cgcaactgtttgcaccgtaaggcctatcagcatcgtgtgggaaacgtcatcgagatcatg
atcatggaagcaatgctacttgcagacaagcacatggagatccccgggtcggggggaaag
acatacacaatctccactgcgattgacgacatggaggcttacaccaaactcacagatgag
atttttcaccagatcctgtattccccgaaggctgagttgcgtgaagcgcaggaaatctta
aaaaatgtcgtctgtcggaaactctataagtgccttggagagacccaacctgaggcaccg
cttcaaatcgaccaggaagagcgtaacgattttgccaagcaggtggctgctgctgttccc
ctccaagctatggacagcagtctggccccagaggactttatagtcactgtcattgagatg
agctacggaatgaaagaccagaaccccatcaacaaggttcgcttttatgccaaagaggac
atgaacaaagcattcaagattcgcaaagaccaggtgtctcagttgctgccggtgatcttt
acggaacagctgatccgtgtttactgtaagaaaactgacccacagaatatggaggcggcc
aagaagcattttgttcagtggtgcatgaacaagaacttcaccaaacccagggacggtgat
gtggtggcacctgagttgactccgctgaaggccagctggaataacaaccgcgacgaggtc
gagtctgactccttacagcttcccaacaaccacaagcgtctcaaaccaaagatgaggcca
ctgaattag
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