Callorhinchus milii (elephant shark): 103189540
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Entry
103189540 CDS
T03088
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103189540
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103189540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Mito_fiss_reg
RRM_5
Motif
Other DBs
NCBI-GeneID:
103189540
NCBI-ProteinID:
XP_042200973
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAAEAVVGSSGFGPERMLRGLKRDEEPGDPAGAEAKRQRLEPALTSGENGVSGTAAAQDS
ILDFKNRSEQTEIMGSQEPAATPDTMVQPYATVPFPPPPPPPQNGIPTEYTVPHTQDYTG
QTPVPDHTLNIYAAGQTHGEPSGTNASVQPVSGTATQTDEAAQTDVQQQTQSTENSESKP
IPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSKGFGFVTFESSADADRARE
KLHGTVVEGRKIEVNNATARVMTNKKMVSPYANGWKLSPVVGAVYSPEFYAGPASLSSLP
FHLHPVASTALSPTHNVPGFPYPAATTAAALRGALRGRGRAVYSAFRAAAPPTAIPTYGG
IVYQEPVYSSKLPQGGYAAYRYAQPATATATAYSDSYGRVYTADPYHTLAPAPTYGVSAV
ASLYRGGYSRFAPY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggtggttggtagtagcggctttggccccgagcggatgctgcggggg
ttgaagcgggacgaggagccgggagatcccgcgggggctgaggcgaagcggcagaggctg
gagccggcgctgacttcgggagagaacggggtgtccggcacagcggccgctcaggactcg
atattggatttcaaaaatcgttcagaacagacggaaatcatgggtagccaggagccagca
gccaccccagacactatggtacagccgtacgctacagttccattccctccccctcctcct
cctccacagaatggaattccaacagagtacactgttccacacactcaggactacacaggc
cagactccagtcccagaccacaccctgaatatctacgccgccggtcagacccacggggag
ccgagtggtacaaacgccagcgtgcagcctgtatctggaactgccacacagacagatgaa
gcagcacagacggatgttcagcagcaaacgcagagcaccgagaacagtgaaagtaaaccc
atccctaaacgtctccacgtctccaacatccccttccgcttccgtgaccctgatcttcga
caaatgtttgggcaattcggtaaaatcatagacgtagaaataatatttaatgagcgaggc
tcaaagggattcggtttcgtaactttcgaatctagtgctgatgccgacagggcgagggag
aaattacacggcaccgtggttgagggccgtaaaatagaggtaaacaatgccacggcccgt
gtgatgactaataaaaagatggtcagcccttatgcaaatggctggaagctgagtccagtg
gttggtgccgtctatagccctgaattttatgcaggtcctgcatcgttatcatcgttaccc
tttcacctacatcctgtcgcctcgacagcactcagcccgacacataacgtgcctggcttc
ccctaccccgcagccaccactgcagccgcgctcagaggtgccctgagaggtcgcggacgg
gcagtgtatagtgcattccgggcagcagcacctcctacagccatccccacctatggagga
atagtgtatcaggaaccagtgtatagcagtaagttaccgcagggaggatatgcagcttat
agatatgcacagccagcaactgccaccgcaacagcgtacagtgacagctatgggcgggtt
tacacagcggacccctaccacacgctcgctcctgctcccacctacggagtcagcgctgtg
gctagtttataccgaggcggatacagccgttttgctccctactaa
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