Callorhinchus milii (elephant shark): 121852719
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Entry
121852719 CDS
T03088
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03022
Basal transcription factors
cmk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121852719 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
121852719 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmk03021
]
121852719 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
121852719 (gtf2h4)
Transcription machinery [BR:
cmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121852719 (gtf2h4)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121852719 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
121852719
NCBI-ProteinID:
XP_042202535
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MQKVKLKCKNLHEFMRDLRPGVLDKLYNHPATCLAVFRELPVLARNYVLRLLFVEQPIPE
AAVSFWVKKENHSELTHCVNTLTSLRLWLPQQLPGGLQGLLLNPIFRHNLRIALLGGGKV
WADDTSQLGPDKHARDIVSLDKYSLERWEVILHFMVGSANAAVSQDLSQLLIQAGLMKSE
PGDSPCITSAGFQFLLLDTSSQLWYFMLQYLQTAEARGMDLVEILSFVFQLSFSTLGKDY
TVEGMNDSLLTFLQHLREFGLVFQRKRKSRRFYPTRLAINLASGVSASARDVHQTGYIIV
ETNYRIYAYTDSELQIALVALFADMLYRFPNVIVAQLTREGVQQAIANGITADQIIHFLR
TRAHAVMLKQTPILPTTITDQIKLWELERDRLRFSEGVLYNQFLSQMDYEVVRDFANDLA
VLVWENPAKRLMVVTPEGHPDVKRFWKRQKHS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagtgaagttaaagtgtaagaatcttcacgagtttatgagggatctgagaccc
ggagtcctcgacaaactctacaaccacccggccacctgcctggcggtcttcagggagctg
ccagtcttggccaggaattatgtactacgtttgctgtttgtggagcagccgattcccgag
gcggccgtttccttctgggtcaagaaagaaaatcacagcgagctgacgcactgtgtgaac
acactgacctccctcaggctgtggttaccccaacagttgccgggggggctgcagggtttg
ctgctgaaccccatcttcagacacaacctgcgcatcgcactgcttgggggggggaaggtc
tgggcggacgacacaagtcaactgggacctgacaaacacgctcgagatatcgtctccctt
gacaagtacagcctggagcgttgggaggtgattctgcactttatggtgggatcagcaaat
gctgccgtcagtcaggacctctcccaactcctcatccaggccgggctgatgaaaagtgag
ccaggagacagtccgtgtataacctcggctggattccaatttctcctcttagacaccagt
tctcagctttggtattttatgctccaatatctacagacagcagaggctcgagggatggat
ttggtagagattctctcctttgtttttcagctcagtttctccaccctgggcaaggattat
actgttgaggggatgaatgattctctgttgacgtttcttcagcatctgagagagtttgga
ctcgtctttcagaggaagaggaagtctagacggttttacccgactcggctggccattaac
ctggcgtctggggtctcagcctctgcgagagacgtacatcagacaggatacatcatcgtc
gagacaaactaccgaatttacgcttacactgactcggagttacagatcgcattggtggct
ctgtttgccgacatgctgtaccgattcccaaacgtgatcgtggctcaactgacacgggag
ggtgtacagcaagccatcgctaacggcatcacagccgaccagattatacactttctgagg
accagggctcatgctgtgatgctcaaacagacaccgattttgcctacgaccattactgac
cagatcaaactgtgggaactagagagagaccgactgcgcttctcagagggggtgctgtat
aaccagttcctgtcccagatggactatgaagtggtcagagactttgctaatgaccttgcg
gtgctggtttgggagaacccggccaagagactaatggtcgtcacccccgagggtcaccct
gatgtcaagcgcttctggaaacgacagaaacacagctga
DBGET
integrated database retrieval system
