Cucumis melo (muskmelon): 103486826
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Entry
103486826 CDS
T03195
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103486826
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103486826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
RNA_POL_M_15KD
zf-RRN7
Motif
Other DBs
NCBI-GeneID:
103486826
NCBI-ProteinID:
XP_008443157
UniProt:
A0A1S3B6X4
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Position
12:complement(23414530..23416771)
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AA seq
525 aa
AA seq
DB search
MSGSCKDCNSRSIFRDDVSGNLICSSCGIVQEFENYEAQLGGINGPQGTFVRVGTSGSGS
VLNYKDKKIYEAQKVIEDITFRLGFSASKSNDVRILVSTITEGEYGLGDWFPILVGACAY
VSMRKDNRPLSMSEVASAVECDLHELGRMVMRVVDFLDLRGSEFPVFDIVGSLERAARNS
PSFSRLEADILERIVKQGIFLLQCAMKWFLTTGRQPLPMVAAVLVLVSKLNEVDVSMENV
AMEVHAKVSTCKKRYRELLEALVEVGKKLPWGKDITTKNIVKNAPFVIQYMELKSMSNAS
GKGKDLENVGIDLQSAVSECLRKELEYESEVNNLEDDSQYFELQGSRWCDESNCDNGNRL
NISHECLSLIYNKFLDEMAELRSSGGINDVYGRKQGRKAGFYSSTEWWEGKSVLSKKLLL
QQLLETDIGSQGIPPSFVSSCNAYKRRKEKVNAAKKRIQRIMHPSNAPAGDVNIKKKRKR
KGADVIEWEDIIIETLLLHGVQEEEIEKGHYKVLLDLHVFTSSTF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctcttgtaaggattgcaacagcaggtccatcttccgagacgatgtttccggc
aacctgatttgctcctcctgcggaattgtgcaggaatttgaaaattatgaggctcagctt
gggggtatcaatggtccacagggcacattcgtccgcgttggaacatcaggttcgggcagc
gttttgaattataaggacaagaagatctatgaggctcaaaaagttattgaagatattacg
tttaggttaggattttctgcttctaagtccaatgatgttaggattttagtatcgacgatt
acagagggcgagtatggattaggtgattggttcccaattctcgttggtgcttgtgcgtac
gtttctatgcgcaaggataatcggccattatcaatgtcagaggttgcatctgccgtcgaa
tgtgatcttcatgaactaggcagaatggttatgagagttgttgattttttggatttgaga
gggtctgagtttccggtgtttgatattgtggggtcattagagcgggccgctaggaattca
ccgtctttctcaagattagaagctgatattcttgagagaattgttaagcaaggaattttt
ttgttacaatgtgctatgaaatggtttctgacaactgggcggcaaccgctaccaatggtg
gctgccgtgttagttctggtgtcgaaattgaatgaggttgatgttagtatggagaatgta
gcaatggaggttcatgcgaaggtttcaacatgtaagaagaggtatagggaacttctggag
gcacttgtggaagttggaaaaaagttgccttggggaaaagatatcaccacgaagaatatt
gtaaagaatgctccttttgtaattcaatatatggaattgaaatcaatgtcaaatgccagt
ggcaaggggaaggacttggagaatgtggggattgatttgcagtctgcagtgagtgagtgt
ttaagaaaagagcttgagtatgagagtgaggttaataatttagaagacgattctcagtat
tttgagttacagggcagtagatggtgcgatgaatcgaattgtgataatgggaacaggctc
aatatttcacatgaatgtttatccttgatttataataagtttttagatgaaatggctgaa
ctcaggtcatcgggtggtattaatgatgtctatggaagaaagcagggaagaaaagctggt
ttttactcgagtacagagtggtgggaggggaaatcagtactaagcaaaaagcttctattg
cagcaattattggagactgatatagggtcgcagggtatcccaccatcatttgtttctagt
tgcaatgcatacaaaaggaggaaggagaaagtaaatgctgctaagaagcgaatccagagg
attatgcatccttcaaatgctccagctggtgatgtaaatattaagaagaaaagaaagcgc
aagggagctgatgttatagaatgggaagatataataattgaaacccttctactccatgga
gtgcaggaggaggaaattgagaaaggccattacaaggtcttgttggacttgcacgtcttc
acttcttcgactttttaa
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