Cucumis melo (muskmelon): 103493623
Help
Entry
103493623 CDS
T03195
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103493623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103493623
Spliceosome [BR:
cmo03041
]
Complex A
U1 snRNP components
U1 related factors
103493623
Complex B
103493623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
103493623
NCBI-ProteinID:
XP_008452677
UniProt:
A0A1S3BVK4
LinkDB
All DBs
Position
7:1751972..1763164
Genome browser
AA seq
985 aa
AA seq
DB search
MENLSQSSGGQFRPVIPAQPGQTFISSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSM
PQLVPRPGHPSYVTPSSQPIQMPYVQTRQLTSVPPQSQQNVAAPNNHMHGLGAHGVPLSS
PYTFQPMSQMHAPVSVGNSQPWLSSASQTANLVSPVDQANQHSSVSAVNPAANAPVFNQQ
SSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN
KVTKESKWTMPEELKLAREQAQKEATQGTQIDVSVTTPQSTPAAGLSHAETPAISSVNSS
ISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAITGTPIASSTSVSGTVSSQSVAASGG
TGPPAVVHANASSVTPSESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNETVLEEKSA
DDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLGERKQAFHE
YLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAVSMFENDERFKAVERSR
DREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKVSSQWRKVQDRLEDDER
CSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRIERKNRDEFRKLMEEHIAAGVFT
AKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLEELENKYHEEKTQIKDVVKAAK
ITITSSWTFDDFKAAIEESGSLAVSDINFKLVYEDLLERAKEKEEKEAKRRQRLADDFSG
LLQSFKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEHITHLQEKAKEKERKREE
EKAKKEKEREEKEKRKEKERKEKDREREKEKGRVKKDETDSENVDVSDTHVYREDKKRDK
DKDRKHRKRHHSATDDGASDKDEREESKKSRKHGSDRKKSRKHAYSPESDSENRHRRHKR
DHRDGSRRNHDELEDGELGEDGEIQ
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctgtctcagtcctcaggtggacagtttcgaccagttatcccagcacaacca
ggccagacattcatttcatcatctgcccaacagtttcagttagcagggcagaatatatct
tcatcaaatgttggagtgccagctggtcaagttcagccacatcagtatcctcaatcaatg
ccgcagttagtgccaagacccggccatcctagctatgtcactccttcgtcccagcccatt
caaatgccttatgttcaaacgaggcagcttacttctgttccgcctcagtcccagcaaaat
gtggctgcaccaaataatcatatgcatggcttgggtgctcatggagtacctctttcttca
ccatatactttccagccaatgtcacaaatgcatgcgcctgttagtgtaggtaatagccaa
ccttggctgtcttctgcaagccagactgcaaaccttgtctcaccagtcgatcaagctaat
cagcattcttctgtttctgccgtaaacccagctgccaatgctcctgtgttcaatcagcaa
tcgtcatctgattggcaagagcatgcatcagctgatggaagaagatattattacaacaaa
aaaaccaaacagtctagttgggagaagccattggaacttatgacaccacttgagagggcc
gatgcatcaaccgtgtggaaggaatttactgctccagatggaagaaagtactattacaat
aaggtgacgaaggaatcaaagtggaccatgccagaagaattgaagttggctcgtgagcaa
gctcagaaagaagccacccaaggaacacaaatagatgtatctgttacgacacctcaatct
acacctgctgctggtctctcccatgctgaaacaccagcaatttcttctgttaactctagc
atttctccgacggtatctggggttgcaaccagtccagttcctgtcactccttttgtttct
gtatccaattctccttcagtgatggttactggatcatcagccattaccggcacacccatt
gcttcatcaactagtgtgtctggaacagtttcttctcaatctgttgctgcttctggaggt
actggtcctcctgctgtggtccatgccaatgcttcgtcagtgactccttccgaaagtctt
gcatctcaagatgtaaaaaatacagttgatgggacttccacagaagacattgaggaagca
aggaagggaatggcagttgcaggaaaagttaatgagactgttctagaagaaaaatctgct
gatgatgaaccattagtatttgccaacaagcaggaggcaaagaatgcatttaaagcactt
ctggaatccgtaaatgttcagtctgattggacgtgggagcaggccatgcgagaaataatt
aatgacaaaagatatggcgccttgaaaactcttggtgagcggaagcaagcatttcatgag
tatttgggacataggaaaaaattggatgctgaagaaagacgcataagacaaaaaaaagct
cgtgaggagttcaccaagatgttggaagagtccaaggaactcacatcgtctaccagatgg
agcaaagctgttagtatgtttgagaatgatgagcggtttaaagctgttgaacgttctaga
gaccgggaggatcttttcgaaagctacatagtggaacttgagcggaaggaaaaagaaagg
gctgcagaggagcacaagaaaaatattgctgaatataggaaattccttgagtcatgtgat
tacataaaggttagcagccagtggcgaaaagtacaagatcggttggaagatgatgaaaga
tgctcacgtcttgagaaacttgatcgcttgcttattttccaggactatatacgtgacttg
gagaaagaggaagaggatcagaagaagatacaaaaggaacgtgttcgacgaattgaaaga
aaaaaccgtgacgagttccgcaaactcatggaagaacacattgctgctggtgtttttaca
gctaaaactttctggcgtgattactgtttgaaggttaaggaattgcctcagtatcaagct
gttgcttcaaatacatctggctcaacaccgaaggacttatttgaggatgttctagaggag
ttggagaataagtaccatgaagaaaaaactcagataaaagatgtggtgaaggcagcgaag
ataaccatcacttcatcgtggacatttgatgactttaaggctgccattgaagagagtggt
tctcttgcagtttcagatataaattttaagcttgtatatgaggacttactagaacgagcc
aaagaaaaggaggagaaagaagccaaaaggcgtcaacgtctagctgatgacttttcagga
ctgctccagtcattcaaggagattacaacttcttccaactgggaggatagcaaacagctt
tttgaagagagtgaagagtatagatcaatcggggaagagagctttgcgaaggaagttttt
gaggaacacatcacacatttacaagaaaaggctaaagaaaaggaacgcaagcgtgaggag
gagaaggccaaaaaggaaaaagaacgagaggaaaaagagaagcggaaggaaaaagagcgt
aaggagaaggacagagaacgtgaaaaagagaaggggcgggtcaagaaggatgaaacagat
agcgaaaatgtagatgtgagcgatactcatgtctacagagaagacaagaaaagggacaaa
gacaaagatagaaaacatcggaagcgacatcatagtgccactgatgatggtgcttctgat
aaagatgagagagaggagtctaagaagtcccgtaaacatggcagtgaccgaaaaaaatca
aggaagcatgcatattcacctgaatcagacagtgagaataggcacagaaggcacaagaga
gatcatcgtgacggttcccgtagaaatcacgatgaacttgaagatggggagcttggtgag
gatggtgaaattcaatag
DBGET
integrated database retrieval system