KEGG   Cucumis melo (muskmelon): 103499294
Entry
103499294         CDS       T03195                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03013  Nucleocytoplasmic transport
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103499294
  09122 Translation
   03013 Nucleocytoplasmic transport
    103499294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103499294
   03041 Spliceosome [BR:cmo03041]
    103499294
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103499294
Spliceosome [BR:cmo03041]
 Complex C
  Other components
   EJC/TREX
    103499294
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103499294
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 103499294
NCBI-ProteinID: XP_008460496
UniProt: A0A1S3CC63
LinkDB
Position
9:12561772..12595122
AA seq 614 aa
MDLSLYLEEFRKAILQVGPPENFALQTVQDVIRPQKHTKLAQDENQLLENILRRLLQELV
SSAVQSTEPVMQYGMSIDEKETSQGHIPRLLDIVLYLCEKEHVEGGMIFQLLEDLTEMST
LKNCKDIFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKASDVVFCGRILMFLAH
FFPLSERSAVNIKGVFNTSNETKYEKQLPDGFSIDFNFYKTFWSLQEFFCNPASLALAST
KWQKFACSLMVVLNTFDAQPLSDEEGDANILEEESATFSIKYLTSSKLMGLELKDPSFRR
HVLMQCLILFDYLKAPGKNEKDIPSETMREEIKSCEERVKKLLEVTPPRGKDFLQKIEHI
LQRENNWVWWKRDGCAPFEKQPIEKKTINDVTKKRRPRWRLGNKELSQLWKWADQNPNAL
TDPQRVRSPAISEYWKPLAEDMDESAGIEAEYHHRNNRVYCWKGLRFSARQDLEGFSRFT
DHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQMATPASENDGEG
TRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQLEADAEVEPGMI
DGETDAEVDLDTAG
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggatctatcactttacttggaagagttccgaaaggccatactgcaagtggggccacca
gaaaattttgctctgcagacagttcaagatgttattagacctcagaagcacacaaaattg
gcccaagatgaaaatcagttgttggaaaatattctacggcgactacttcaagaattagtg
tcatctgccgtccaatcaacagagccagtaatgcagtatgggatgtctattgatgaaaag
gaaacttcacagggtcatattccacgtcttcttgacattgtcctatatctttgtgagaaa
gagcatgtcgaaggaggcatgatattccaactgttggaggacctgactgaaatgtcaaca
ttgaagaactgcaaagatatttttggttacattgagagtaaacaagacatattgggaaag
caagagctttttgctcgcggaaaactcgtcatgttgagaacgtgcaatcaattgctccgt
cgtctatcaaaggcaagtgatgtggtgttttgtggacgcattctgatgtttctagcacat
tttttccctctatctgaacgctccgctgtgaatataaaaggagtgtttaacacctccaac
gaaacaaaatatgagaaacaactccctgatggtttttctattgatttcaacttttacaag
accttttggagtttacaggaattcttttgtaatcctgcttcccttgcactcgcttcgacg
aagtggcaaaagttcgcatgtagtttaatggtcgtattgaatacatttgatgcacaacct
ttgtctgatgaagagggagatgctaacatcttggaggaagagtcagcaaccttcagcata
aaatatcttactagtagtaaactgatgggtttagaattgaaggacccaagttttcggcgt
catgttcttatgcagtgccttatattgtttgattatctaaaggccccaggaaaaaatgag
aaagatattccatctgaaaccatgagagaggaaattaaatcttgtgaagagcgtgtgaag
aagttgcttgaggtgacaccgcccagggggaaagatttccttcagaagattgagcatata
ttacaacgggaaaataattgggtatggtggaaacgtgatggttgcgctccttttgaaaag
caaccgattgaaaagaaaaccatcaatgacgtaactaaaaaacgtaggccaagatggaga
ctggggaataaagaactctctcaattgtggaaatgggcagatcagaatccgaatgctttg
actgatcctcaacgtgttcgcagtcctgcaatttctgagtattggaaacccttggcagaa
gatatggacgagtctgctgggattgaagctgaatatcatcatagaaataaccgagtttat
tgctggaaaggccttcggttttcagctcggcaggatttagaaggattttctcggttcacc
gaccatggcattgaaggtgttgtgccattggaactcctgccacctgatgtacgagccaag
taccaagccaaaccaaatgagagatctaaacgtgctaaaagggaagaagcaaaaggggca
gtccagcaagttgatgaaaatcagatggcaactccagctagtgagaatgatggcgaagga
accagaagtgatcctgatgggccatcggcagggatggatgtcgatacagctattgccacg
ggcaatgtatctcaaggtggtatttcaactccagaagaaaataaactaagctctgacacg
gatattggtcaagaggcaggccagttggaagccgatgctgaggtagagccgggcatgatt
gatggcgagacagatgcagaggttgatttggacactgcaggttga

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