Cucurbita moschata (crookneck pumpkin): 111438597
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Entry
111438597 CDS
T05248
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5-like
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111438597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111438597
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
111438597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
111438597
NCBI-ProteinID:
XP_022932235
UniProt:
A0A6J1F1N7
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MASETEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLRIPQGERTKTTNALLVSLM
NQLEKDKKSLNLGPDDSLHLEGFALGVFAKADKQDHAGRADLNTAKTFYAASIFFEIISQ
FGPLQPDLEQKRKYAVWKAADIRKALKEGRKPQPGPPSGDEDLSVPSSTPTSANDARPGE
PQVSRTRSQSDSLPQVYDKVNDDHSNVPQTPQVYDNMNNHTSLNTSPPARFHNDVNNQHP
SNIPSYPAADYPSHEFHLPPPRNEPDNSSSYSQPYHHIQSYSEHQQPLPHNYVSNETSPN
YSYSHFQSYPSFSETSLPTAPSHHPTYYQGSDASYSSHVTPPASYPSASQYHSNGREGTA
SEPQPTAAPAKSFHYDSNYQPPPEKIAEAHKAARFAVGALAFDDVSVAVEHLKKSLELLT
NPSAGL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagaccgagccggcgaagctccttctgccctacctccagcgagcggacgaa
ttgcagaagcacgaacctcttgtcgcatattactgtcgattatatgctatggaacgtggg
ctaaggattccacagggcgaacgtacgaagaccacgaatgccctccttgtttccctcatg
aatcagctcgaaaaggataagaagtcactcaaccttgggcctgatgatagtttgcatcta
gaggggtttgcattgggtgtctttgcaaaggcagacaaacaagatcatgctggacgagca
gatttgaacactgcaaaaacattttatgctgcaagcattttcttcgagattatttcccag
tttggtccacttcaaccagacctggagcaaaaacggaaatacgccgtctggaaagcagca
gatatcaggaaggctttgaaagagggaaggaagccacagcctggtccaccttctggtgat
gaagatctgtctgttccttcaagtacacctaccagtgcaaatgatgcaagaccaggagag
cctcaagtctcgagaactcgatcacaatcggattccttaccccaggtttatgataaggtt
aatgatgatcattcaaatgtcccacaaactcctcaggtctatgacaacatgaacaaccac
acttctttaaacacttctccgcctgctcgattccataatgacgtcaacaatcagcaccct
tcaaatattccatcataccctgctgctgattatccatcccatgagtttcatctacctcct
ccgaggaatgaacctgacaacagttcctcttactctcagccataccaccacatccaatcc
tactcagagcatcaacagcctttgcctcataattatgtatctaatgaaacctccccaaat
tactcatattcccatttccaatcttatccaagtttctcggaaactagcctcccgaccgcc
ccttctcaccatccgacctattaccaaggatccgatgcttcatactcttctcacgtgact
cctcctgccagctacccatcagcttcccaatatcattcaaacggtagagaggggacggcc
tcagaacctcaacctacagcagctccagccaagtcgttccattatgacagcaactaccag
ccacctcctgagaaaattgctgaggcacacaaggctgcgaggtttgcagtaggggctctg
gcatttgatgatgtttcagttgcagtagaacacttgaagaaatcactggaattgttgact
aacccttcagccggtctgtga
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