Cucurbita moschata (crookneck pumpkin): 111452197
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Entry
111452197 CDS
T05248
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111452197
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmos01002
]
111452197
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111452197
03036 Chromosome and associated proteins [BR:
cmos03036
]
111452197
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111452197
Peptidases and inhibitors [BR:
cmos01002
]
Metallo peptidases
Family M67
111452197
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111452197
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
111452197
BRISC complex
111452197
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
111452197
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
111452197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Tim29
Motif
Other DBs
NCBI-GeneID:
111452197
NCBI-ProteinID:
XP_022948552
UniProt:
A0A6J1G9J9
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPMYRNSVIDVESSLSSS
DNLSAKVGGPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGGSYLTS
NTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSPLMSFT
DLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAITALQD
RLKENEIRLALLAEEARNLEVEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASVG
ARTAGSSVHRSRKGL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacggccgtgaagatgtccgaagacgtttggtttacttgtctcactcatgca
ttgtccaccgagactgaagaaatcatggggcttcttcttggcgatattgagcattcaaaa
aatggaagtgttactgcactaatttggggagcatcgcctcagacacggtctgacagaagg
aaggaccgtgtggagactcatcctgaacaattggctgctgcatctgcccaggctgataga
atgacaacaatgactgggagaacaacaagagttattggatggtaccattcacatcctcat
ataacagtgcttccttctcatgttgatgtgcgaactcaagggacatatcagctccttgat
tctgggtttattgggctgatattttcctgctttagtgaagatgcaaacaaggttggaaga
attcaagttattgctttccagtcctctgatggaaaacagaatcacctctcaagacctatt
tccctatctcctatgtaccgaaattcagtgattgatgttgaatcttctttgagttcctct
gataatttatcagcaaaagtgggcggaccaggggagagtcccgaacaagacactggtgat
tcaatggttgctggagctatgaagggttctggacgatcttcagagttgggttatttcttt
gctaatgctgacaccaactaccaaggaaaagaaaaaatggggggtagctatcttactagc
aatacaaacagtggtactactgatatcgatcctatggacttgactgaaagtatgcaagaa
gcaatgcaccgttcaaatatcgaaatgagtgctgctgaattctcaaggaaagagattcct
ctgcatgttatgccgagtgcttccctcataaagcttgattcaccattaatgtcttttaca
gatttacaaaatgttctgtttgaagaggagagatcagcttataaccaagccatcttaaat
aatatgaaggatgggaaagcgcatccgctgacgttcatacatcacacctcaacatatcag
gcttcaatgtgcaagttaattgaatattgtcttagtcctgccataaccgcgctccaggac
cgtctaaaagagaacgaaattcggttagcattgctggctgaggaagccaggaatctggaa
gttgaggctggaaaatcaaacgagtcagtcccgggatcacctcaccaagtcactcatgga
tctcgagcaagcgcttcgacaacacacagggactcgtatgcttcaactgcatcagtcggt
gcgcgaaccgcaggaagctctgttcaccgaagtagaaaggggttgtga
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