Cucurbita moschata (crookneck pumpkin): 111464354
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Entry
111464354 CDS
T05248
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111464354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111464354
03036 Chromosome and associated proteins [BR:
cmos03036
]
111464354
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111464354
Coactivators
SAGA/TFTC/STAGA complex
111464354
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111464354
STAGA complex
111464354
TFTC complex
111464354
SAGA complex
111464354
SLIK complex
111464354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
111464354
NCBI-ProteinID:
XP_022964297
UniProt:
A0A6J1HHF5
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MADSIPSPRPVQPNPMDPSPPPPQQQPQVQPSTAAIPQNSSNSTNSSANPPIPAASALAQ
SPSIDQLHPLSQISSPPPLSHISQNPQNQQQQQQLSPAVGLEYQQKPLQLQQQQQQQQQQ
LQQHSQQMVQQPQNANAMTNFQIQQALQRSPSMSRLNQQQQFGMMRQQSGLYSPMSFGGS
STNQQQQLQQPNQQHQMGTGNLSRSALMGQGNHLPMLSGATAAAQYNLQSQLLASSKQKA
GLVQGAQFQSSNSHGQPLQGMQTMGMMGSMNLSSQLRANGLASYAQQRINQGQIRQQLSQ
QSSLTSPQVQNLPRMSNLGFMNQQLSNLAQNGQPTMMQNSLQQQQWLKQMPSMSSPGSPS
YRLQQRHQQVLLQQQLASSSQLHQNSMSLNPQQFPQLVQQQPSMGHQQLHQQQQPQAPQQ
PQAQQQQQQQQQLQQLQQLQQQPLHQQQQQQLLQQPSQLQSLQPALHQQQHSPRIAGLAA
QKSLSLTGSHPDATVSGTSTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPLGKLEPEVED
LLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNRNKN
LSSSDTHKKRLDMIRILKEASRVETNVNSPKEIVRQGVGMPIGTNNLIRPSSSSEQLLSQ
TTGSQLLQQMTRF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtattccgtcgcctagaccggtccaaccgaaccctatggacccttcccca
ccgccgccgcagcaacaaccgcaggtccaaccttcaaccgctgctattccgcagaattca
tctaattcaacaaattcgtctgcaaatcctcccattcctgcggcttctgcgcttgctcag
tcgccctcgattgaccagttacatccactatcgcaaatttcttctcccccccctctttcg
catatctctcaaaatccgcaaaatcaacagcagcagcaacagctaagccctgcggttgga
ttggagtaccaacagaagcctctacagctgcagcagcagcagcagcagcagcaacagcaa
ctgcaacaacattcgcagcaaatggtgcaacagcctcagaatgcgaatgcgatgacaaat
ttccaaatacagcaggctctacaacggtccccttcaatgtccaggttgaaccagcagcag
cagtttgggatgatgagacaacaatcggggctttatagtccaatgagttttggtgggtct
tctacaaaccagcaacagcagctacaacagcctaaccaacaacaccaaatgggaaccggg
aatctgtcgcggtctgcattaatgggtcagggtaaccatttgcccatgttgtctggggcg
actgctgctgctcagtataacttgcagtcacagttactggcttcgtcgaagcaaaaagct
gggttagtccagggtgcacaatttcagtcgagtaactctcatgggcaacctttgcaagga
atgcaaacaatggggatgatgggatcaatgaatttgagctcacaactaagagctaatggc
cttgcgtcatatgcccaacagagaataaaccaaggtcaaataaggcagcaattatcccaa
caaagttcacttacctctccacaggttcagaacttaccgagaatgtcaaatcttggattc
atgaatcaacaattgagtaatttagctcagaatgggcagccaaccatgatgcagaactct
ttgcaacagcaacagtggctgaagcaaatgccatcgatgtctagccctggctcaccgtca
tatcgtcttcaacagaggcatcaacaggtcctgttgcagcagcaactggcttcatctagt
caattgcatcaaaactccatgtccttgaaccctcaacaatttcctcagcttgtacagcaa
cagccgtccatgggacatcaacagcttcatcaacagcaacagccacaggcaccgcaacag
ccacaggcacagcaacaacaacaacaacaacagcaactgcaacagctacaacagctacaa
caacagccacttcatcaacaacaacaacaacaactacttcaacaaccatcacaactccaa
tctctgcaaccagcattgcatcagcagcagcattctcctaggatagctggacttgcggct
cagaaatctctcagtttgactggatcacatccagatgccacagtatctggcactagtaca
cctgggggaagttcaagccaagggacagaagctgccactcaagtcctcggaaagagaaag
atacaagatctagtttcacaggtagatccacttggaaagctggaacctgaagtcgaagat
cttctcttggagattgctgatgattttattgattcggtgaccacattttcatgcaatctg
gcaaaacacagaaaatcttcaactttagaatccaaagatttattgctacacttagagaag
aattggcagttaaacgttcctggatattcgagtgacgagtggaagaatcgcaacaaaaat
ttatcatcaagtgatactcacaagaaacgtctggacatgatacgcatactgaaggaagca
tcccgtgtcgaaacaaacgtaaatagccctaaagagatagtccgacaaggggttggaatg
cccatcggtaccaacaacctaatcaggccttcatcaagctcagaacaactattgtcacag
acaactggttcgcagctactgcagcaaatgacgaggttctga
DBGET
integrated database retrieval system
