Cyclobacterium marinum: Cycma_4560
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Entry
Cycma_4560 CDS
T01592
Name
(GenBank) alpha amylase catalytic region
Organism
cmr
Cyclobacterium marinum
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
AEL28248
UniProt:
G0J1N9
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Position
complement(5529608..5531293)
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AA seq
561 aa
AA seq
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MIKSINEIDLSPKPGKAYWVNCHREWREEIIYFLMVDRFHDSEARHSKNFDIRHPGFGNE
DQLQKPFGGTIKGIINNIDYIKNLGCTALWLSPVFENNPGSYHGYAIQNYMDVDKRWGTK
EELEQLVDKAHALDIRVFLDIVLHHSGDNWSYPFDYDYFYAEGQRFPLGSWREKDRPLPV
ELKDQEVYNRKGQIRNFDAYPETQEGDFCTLKTFRNDGSPASEDLQAILAKIHCYWIRET
DVDGFRLDAVKHMKGGDISRFCSNIREYAYSLGKRNFFLFGEIIGNDEMGNPYIGPKMLP
EDRNVYYGLDSILDHPLHSVLAEVIKGNSSPNKLIQRYSDLQRNALSRGEYGDFLVTYID
DHDQVGMDFKHRFGHNATPEQIVAGMGFLICALGAPCIYYGTEQGFEGNGMDDRYIREGM
FDPDDKETNVLNQESWIYKNIAVLAHLRQKEAILKFGRMYFRETSENGLDFQFPNCEECL
LAFSRILYQGEILIVYNSSPKDTKEEYIVVDSIINKEVIRMECIYGNTKKIPIEKNIDQQ
DGRLFIKVKLKPMEFLIFKNS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcgatcaacgaaatagatctttccccgaaaccgggtaaggcctactgggta
aactgtcacagggaatggcgagaggaaatcatttattttctgatggtcgaccggtttcat
gatagcgaggcgcgacattcgaagaatttcgatatccgtcatccaggtttcggtaatgaa
gatcaactgcaaaagccctttgggggcaccattaagggcatcataaacaacatcgattat
ataaaaaatttgggttgtactgccctttggctgagtcctgtgtttgaaaataatcctgga
tcctaccatggctacgccatacagaattatatggatgttgacaaacgctggggtaccaag
gaagaactggaacaactggtggacaaagcccacgcgctggatatacgggtgtttttggat
atcgttctgcaccattcgggagataattggtcctatccctttgattacgactatttctat
gcggaagggcaacggtttccactgggaagttggcgcgagaaagacaggccgcttccagtc
gaactcaaagatcaggaggtttataaccgaaaagggcagatcaggaatttcgatgcgtat
cccgagacccaagaaggagacttctgtaccttaaaaacatttaggaacgatggttcccct
gctagtgaagatttacaggcgatattggcaaagatacattgttactggatacgtgagacg
gatgtggacggttttcgtttggatgccgtcaaacatatgaaaggtggcgatatcagccgt
ttttgttctaatataagggaatatgcctattcgctgggaaagagaaacttctttttgttt
ggcgaaattatcggtaatgatgagatgggcaatccgtatataggccccaaaatgctgccg
gaggatcggaatgtatattatgggctcgattccattttagatcatccgttgcacagtgtt
cttgcagaagtgataaagggaaattcttccccgaataaattgatacagcggtattcggac
ttacaaaggaatgccctaagccgcggtgagtatggggatttcctggtcacctatatcgat
gatcatgatcaagtaggaatggactttaaacaccgctttggccataatgctactcctgaa
caaattgttgcgggcatgggctttcttatttgtgccctaggcgctccatgtatttattac
ggtactgaacaaggttttgaaggcaacggcatggatgaccgatatattagggaaggaatg
ttcgatcctgatgataaggagacaaacgtattgaaccaagaatcatggatatacaagaac
attgcggtcttggcgcatcttagacaaaaggaagccattttaaagttcggcaggatgtat
ttcagggaaacttcagaaaacggacttgattttcaatttcccaattgtgaggaatgtctt
ttggcattttcaaggatcctgtatcagggagaaattcttatagtctataattcttcccca
aaggataccaaagaggaatatatagtggtcgatagcattatcaataaagaggttattcgt
atggaatgcatctatggcaacacgaaaaaaatcccgatcgaaaaaaatatagatcaacaa
gatggccgcctttttatcaaggtaaagttaaaacccatggagtttttgatattcaaaaac
agttaa
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