Corynebacterium mustelae: CMUST_06195
Help
Entry
CMUST_06195 CDS
T03941
Symbol
deaD
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmv
Corynebacterium mustelae
Pathway
cmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMUST_06195 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmv03019
]
CMUST_06195 (deaD)
03009 Ribosome biogenesis [BR:
cmv03009
]
CMUST_06195 (deaD)
Enzymes [BR:
cmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CMUST_06195 (deaD)
Messenger RNA biogenesis [BR:
cmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CMUST_06195 (deaD)
Ribosome biogenesis [BR:
cmv03009
]
Prokaryotic type
rRNA helicases
CMUST_06195 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
AAA_22
HEM4
Motif
Other DBs
NCBI-ProteinID:
AKK05575
UniProt:
A0A0G3GYE0
LinkDB
All DBs
Position
1289939..1291984
Genome browser
AA seq
681 aa
AA seq
DB search
MSITDDATSGAVELDENIVSESQETSQDVHGVTTSEPVTSHDDARVADNSEGTGSAKTEA
DIEENKESDSEGDSVADGSDDVPQGPRFKDLGLPKPVLKAIKKVGFETPSPIQAQTIPVL
LEGHDVLGLAQTGTGKTAAFALPILSLIDADVRHPQALVLAPTRELALQVADSFQSFADH
LGNISVLPIYGGQAYGIQLSGLRRGAQIVVGTPGRVIDHLEKGSLDISELRFLVLDEADE
MLNMGFQEDVERILEDTPDDKQVALFSATMPNSIRRISRDYMNEPHEIQVKSETRTNTNI
TQRFLNVAHRNKLDALTRILEVTEFEAMIMFVRTKHETEELAEKLRARGFSAAAINGDIA
QQQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNYDIPSDTESYVHRIGRTGRAG
RSGEAILFVTPRERRFLRNIERATNAPLEEMELPTVDEVNESRKAKFADSITESLEDSQV
AIFRSLIKAYSEEHDVPLEDIAAALATQARAGDEFLMKEPPPEKRRERRDRRDRFDDRDD
RRGRGRGERDRGRERFERSNKDMAVYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRIV
IAVDHTLVELPKDLPRSVFDNLRDTRISGQLIHMEKDTSGASMDRGGRGGRSSGGYRDRD
RDRGGRGRNRSGDRGGRRWRD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaccgatgacgctaccagcggcgcagttgagctggatgagaatattgtgtcg
gaatctcaggaaacttcgcaggacgtccacggcgtaaccacctctgaaccggttactagc
cacgatgacgccagggttgcggataattctgagggcaccggctctgctaaaactgaggca
gatattgaagaaaacaaagagagtgactcagagggtgactccgtagctgacgggtcggat
gacgtcccacagggcccacgatttaaagatctaggtttgcctaagcctgtgctgaaggcc
attaaaaaggtcgggtttgaaactccatcacccattcaggcacagacaatcccagtcctg
ctcgaagggcacgacgttttgggcttggctcaaaccggtactggtaaaacggccgcattc
gcgttgccaattctttcgcttatcgacgccgatgtgcggcatccgcaggcgttagtcttg
gcgcctacgcgtgaattggcactccaggtagcggactcgttccaatcctttgccgaccat
ttgggcaatatttccgtcttgccgatatatggtggacaggcatatggcattcagctatcc
ggtttgcggcgcggagcacagatcgtggtgggaaccccaggccgtgtcattgaccatttg
gagaagggctccttagatatctccgaattacgctttttggtactcgacgaagccgatgag
atgctcaacatgggcttccaggaagatgtcgagcgtattctggaggataccccagacgat
aaacaggtggcgctcttctcagcgacgatgcctaacagcattcggcgaatctcgcgggac
tacatgaatgagccgcatgagattcaggtgaaatccgaaactcgaaccaataccaacatc
acgcagcgcttcctgaatgtggcgcaccgtaataagcttgatgctttgactcgaattctt
gaggttaccgagtttgaggcgatgattatgtttgtgcgtaccaagcacgaaaccgaagaa
cttgcggaaaagctgcgggctcgtggtttctctgcggccgctatcaacggcgatattgcg
cagcaacagcgtgaacgcactgttgaccagcttaaagatggtcgcctagatattctggtt
gccaccgatgtcgctgctcgcggtcttgacgtggaacggatttcgcacgttttaaactac
gatattccgtccgataccgaatcatacgtccaccgtattgggcgcaccgggcgggctggt
cgtagcggagaagcaatcttatttgttacccctcgtgaacggcggttcctgcgcaatatc
gaacgcgccaccaatgcgccgttggaggagatggaactacctaccgttgacgaagtcaat
gaatcgcgcaaagcaaaattcgctgattccatcaccgagtcattggaagattcgcaggtc
gcaattttccggagcctaatcaaagcgtattccgaagagcatgatgttcccctggaggat
atcgctgccgccttggcaacgcaggcccgagcaggcgacgagttcttaatgaaggagccg
ccaccggagaaacgtcgggaacgacgtgaccgccgtgaccgctttgatgaccgggatgat
cgtcgtggacgtggacgtggcgagcgggatcgtggtcgtgagcgctttgaacgcagtaat
aaggatatggcagtctatcggcttgctgtgggtaagcggcagcatgttcggcctggtgcg
atcgtaggtgcactcgccaatgaaggcggattgtctaacaaggacttcggccggattgtc
attgcggtcgatcacacgttggtcgagctgcctaaggatcttcctcggtctgttttcgat
aacttgcgggatactcggatttcaggtcagttaatccatatggagaaagacacctccggt
gcgtctatggatcgcggcggccgcggtggacgttcatctggcggttaccgggatcgggac
cgggatagaggcggtcgcggccggaatcgaagcggcgaccggggcggtcggcgctggcga
gattaa
DBGET
integrated database retrieval system
