Chlamydia muridarum Nigg3: DNC_04445
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Entry
DNC_04445 CDS
T03505
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cmx
Chlamydia muridarum Nigg3
Pathway
cmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DNC_04445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmx03400
]
DNC_04445
DNA repair and recombination proteins [BR:
cmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DNC_04445
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DNC_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
UvrB
UvrB_inter
ResIII
DEAD
UVR
AAA_22
AAA_30
Kinesin
Microtub_bd
SWI2_SNF2
UB2H
Motif
Other DBs
NCBI-ProteinID:
AIW23898
LinkDB
All DBs
Position
1012766..1014757
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AA seq
663 aa
AA seq
DB search
MNQQFVLQAPFLPCGDQPEAIRQLSRGILDGIPSQVLLGTTGSGKTFTMANVIANVNVPT
LVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLINDEID
KLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMALILEVGKEYPRSQLSAQLVRMH
YQASASPQRSAFRERGSVIDIFLAYESDLAVRLEFVNDTLVSIEYTDPLTMIPSHTVPSV
TLYPGSHYVTPEAVREQAIRTIREELEQRLLFFEGRPVEQERLFQRTTHDIEMIKEIGFC
KGIENYSRHFTGAAPGEPPTCLLDYFPEDFLLIIDESHQTLPQLRAMYRGDQSRKQSLVE
YGFRLPSAFDNRPLTYEEARRYFRRVVYVSATPGELEVQESRGHIIEQIIRPTGIPDPLP
EIRPATGQIDDLLEEIRQRLRKDQEKILVVSVTKKLAEDIAAFLAELGIAAAYLHSGIET
AERTQILTDLRLGTIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQFCGRA
ARNVHGKVIFYADRITPSMDHMLKETERRRQIQLDYNKKHNITPKPIIKPILANPITKEG
AQEDSRPETQSTEDLESSIKQYEEAMYKAAQDFQFDEAAKYRDLMNAAKRQLLFKQGEDG
NSK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ctgaatcagcagtttgtattacaagcccctttcctcccttgtggagatcagcctgaggca
attcgtcagctttctcgaggaattttagatgggattccctcacaggttcttctaggaacc
actggatctggaaagacatttaccatggcgaacgtaattgccaacgtcaatgtccctacc
ttagtactcgcgcataataaaacactggccgctcagttgtaccaagaatttaaagcattc
tttcctgaaaatgctgttgaatactttatttcctattacgattactaccaacccgaagct
tatattgcgcgtagcgatacctatatcgaaaaaagcctgctcatcaatgacgaaattgac
aaacttcgcctttctgcgacgcgatctattttagaacgaagggatactttaatcgtctcc
tctatttcttgtatttacggcattggctctcccgacaactactcttctatggctcttata
ttagaagttggaaaagaatatcctcgttcccagctctctgcccaactcgtacgcatgcac
tatcaagcttctgcctcccctcaacgcagtgcctttcgcgaacgaggtagcgtcatagat
attttccttgcttatgaaagtgatcttgccgttcggcttgaattcgtcaacgatacactt
gtttccatagaatatacagatccgttgaccatgatcccctctcatacggtcccgtccgtt
actctttatcctggatctcactacgttactcccgaagcagttcgtgaacaagccattcgt
accatccgcgaagaattagagcagcgtctgctgttttttgaaggacggcctgtagaacaa
gaaagactatttcaacgcaccacgcacgatatagaaatgatcaaggaaatcgggttctgt
aaagggattgaaaattactcgagacactttactggagcagctccaggagaacctccaact
tgtcttcttgactatttcccagaagatttccttttaatcatcgatgagtcccaccagaca
cttcctcagttgcgtgccatgtatcgcggagatcaatctcgcaaacagtctcttgttgaa
tatggattccgtcttccctctgcttttgataatagaccgcttacttatgaggaagctcgg
cgatattttcgtcgcgtagtttatgtatcggctactcctggagaactcgaagtccaagaa
agccgaggacatatcatagaacaaatcattcgtcctacagggattcctgatccactgcca
gaaattcgcccagcgacaggacagatagatgacctcttagaagaaattcgtcagagactt
cgcaaagatcaagaaaaaatattagtcgtctctgtcacaaaaaaattagctgaagacatc
gcagccttcttagctgaactgggaatcgctgccgcctatcttcattcaggtattgaaacc
gcagaaaggacacaaattcttacagatttacggttaggaacgatagatgttcttattgga
gtaaaccttcttcgagaaggaatcgatttacccgaagtgtcattagtcgcgattcttgac
gcagataaagaaggttttctacgtagtagcgcctcccttattcaattctgcggacgagcc
gcacgcaatgtccatggaaaagtcattttttatgccgaccgcatcaccccttccatggat
catatgctcaaagaaacagaacgacgcagacaaatacaactcgattacaataaaaaacat
aatatcacccctaagcccattattaaacccatcttagctaaccccattactaaagagggc
gctcaagaagattcccgtccagaaacccaatctactgaagatctcgaatcttctatcaag
caatacgaagaagcgatgtataaagctgctcaagattttcagtttgatgaagcagccaag
taccgtgatttgatgaatgcggcgaaacgccaactgctttttaaacaaggagaggatgga
aattcaaaatga
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