Chelonia mydas (green sea turtle): 102929297
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Entry
102929297 CDS
T02989
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03250
Viral life cycle - HIV-1
cmy04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102929297 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102929297 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmy03400
]
102929297 (SAMHD1)
DNA repair and recombination proteins [BR:
cmy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102929297 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
SAM_Ste50p
HD_assoc_2
PDEase_I
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102929297
NCBI-ProteinID:
XP_037771363
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Position
13:complement(29645649..29720226)
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AA seq
628 aa
AA seq
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MSRSGAAAAGGVAKRGRPASPPDGFCTPEKRVSAWGAMAPEGPHPRHWGTEQVCDFLCRN
GFSEPGLLRRFRENQITGAVLPYLTKSELKDLGVGPLDLRVKLLVCLQKLEKNHGDIMKV
FNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGYLAGC
LVQALHERQPELEINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHETAS
VQMFEHLITSNGLEKVMEDYGFVLKEDMDFIKEQIGGPLDTTPCRGLWPYRGRSEEKSFL
YEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVKNKKHICTRDKEVG
NLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIKIEGTGGKHYKISTAMEDME
AYTKLTDNIFLEILYSSNKELTEAREILRKIELRDLYKYLGETRTEPGKEITEEQYDRLP
ADIVASRPKNVPQDIELNAEDFIVDVINMDYGMKEQNPIDKVRFYCKSDPSQAVKISKEQ
VSRLLPETFAEQLIRVYCKKKDEKSLDAATKCFIQWCMNMDFTKPQDGDVVAPELTPMKA
SWNDPDEDELQSANDCREASKSRTRLFQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagcggagctgcagcggccggaggcgtggccaagcgtggccggcccgccagc
cctcccgatgggttctgcacccccgagaagcgggtctccgcctggggggccatggccccg
gaggggccccacccgcggcactggggcaccgagcaggtctgcgacttcctctgccgcaac
ggctttagcgagcccggcctgctgcgccgcttccgagaaaatcaaatcaccggggcagtg
ctgccttacctcactaaatctgaacttaaagacctaggagttgggcccttggacttgaga
gtgaaattgcttgtttgcctgcaaaaattagaaaaaaatcatggtgatataatgaaggtt
tttaatgatcctattcatggccatattgaaatacatcctctcctcgttagaatcattgac
acacctcagtttcaacgcctgcgatatataaaacagctgggaggcacttactatgttttc
ccaggagcatcgcacaaccgctttgaacattccttgggggtaggctatctggcaggatgt
ctggtccaggcattacacgaaagacagccagagttggaaataaaccagcgagatattctc
tgtgttcagattgctggactttgtcacgatttgggtcatggaccattttcacacatgttt
gatggaagatttattccacttgctcgcccagggctgaaatggaagcatgaaactgcttct
gttcagatgtttgaacatctgattacttccaatgggctagaaaaagtcatggaagattac
ggttttgtcctgaaagaagatatggacttcatcaaggaacaaataggaggaccactagat
acaaccccatgtcgaggtttgtggccataccgtggtcgatcagaagagaaaagcttcctt
tatgagatagtggctaacaaaagaaatggcatcgatgttgacaaatgggattactttgcc
agggattgccatcacttaggaatccagaataattttgattataagcgcttccttaaattc
gctcgggtctgtgaagtgaaaaacaagaagcatatctgtacccgtgacaaggaggttgga
aatctgtatgacatgttccatacacggaattgtttgcaccgcagagcttaccagcacaag
gttggcaacatcattgaaacaatgattacagatgccttcctaaaagcagatccctatatt
aaaatagagggcactggtggaaaacactacaagatttctacagcaatggaggatatggaa
gcttacactaagctaacagataacatctttctggagattctgtactctagtaataaagag
ctgacagaggcacgagaaattttgcggaaaatagagcttcgcgatctatacaagtattta
ggagagactcggactgaaccaggaaaagaaattacagaggagcagtatgataggctgcca
gctgacattgttgcttccagaccaaagaatgtacctcaggatattgaattgaatgctgaa
gactttatagttgatgttatcaatatggactatggaatgaaagaacagaaccctattgat
aaagttcgcttctattgcaagtctgatccgagccaggcggtcaagatttcgaaagaacag
gtgtcaaggcttctgccagagacatttgcagagcagctgatccgggtttattgcaagaaa
aaggatgagaagagtttagatgctgcaacaaagtgttttattcagtggtgtatgaacatg
gattttactaaaccacaggatggtgatgtggtcgcccctgaactaactccaatgaaagca
agctggaatgaccctgacgaggatgaattgcaaagtgcaaatgactgcagggaagcttca
aaatccagaaccagactctttcaataa
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