Chelonia mydas (green sea turtle): 102933608
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Entry
102933608 CDS
T02989
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102933608 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102933608 (CNGA1)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102933608 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF2207_C
Ion_trans_2
Zip
NPR3
PhoU
Med19
NatA_aux_su
Connexin
RR_TM4-6
DUF789
Sec62
DDHD
Motif
Other DBs
NCBI-GeneID:
102933608
NCBI-ProteinID:
XP_007071154
LinkDB
All DBs
Position
4:92233513..92252006
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AA seq
730 aa
AA seq
DB search
MKVGVINTHRSYINVPRLAVQNADAGVGRIENRNRRSLAEVYDSSSILQTQEHGDSCPGY
SSTNNSQAVKGVLQRISNFLVTLKDWKKRVSDEGCQTSDSFLEKIEGPQLRWSNNFNNQN
LCGEIAEEIMEHYLPSPIAQYNINNNSNKDEEKQKKEKKGKSDGKKEKKKDTEMQKNKEK
KEKHRNKDKHKKKDKKEEEKKDLFVIDPSGNLYYYWLFCIALPVMYNWTMIIARACFDEL
QNDHLGMWFIFDYISDIIYIADMFVRTRTGYLEQGLLVKDELKLKQRYTGTLQFKLDLLS
VIPTDLLYFKLGLTYPELRINRILKVSRMFEFFQRTETRTNYPNIFRISTLVMYIVIIIH
WNACVYYSISKAIGFGADTWVYPNTSDPEFARLARKYVYSLYWSTLTLTTIGETPPPVQD
SEYFFVVVDFLVGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVNKEIEK
RVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAISVHLDTLKKVRIFADCEAGLLVELV
LKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNI
KGSKAGNRRTANIRSIGYSDLFCLSKDDLVEALIEYPDAKALLEEKGKEILLKDGLLDID
VANTGSDPKNIEEKVIQMEGAVDNLQTKLARLLAEYDATQQKLKKRLTEVEKILKSTMQF
EFSDLEELDK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttggtgtgattaacacccatcgctcctatataaatgttcccagactggcagta
cagaatgctgatgcgggcgtaggaaggatagagaatagaaacaggaggtctctggctgaa
gtgtatgatagttcatccatattacaaacacaggagcatggggacagctgccccggttat
tcttccacaaacaactcacaggcagtgaaaggagtgctacagagaatatccaactttttg
gttactttaaaagactggaagaagagggtttccgatgaaggctgccaaacctcagactct
ttcttggaaaaaattgaaggtccacagctaagatggagcaataattttaataatcagaat
ctctgtggtgagatagcagaagaaatcatggaacattacctacctagtcccattgcacag
tacaatatcaacaacaacagtaataaagatgaagagaaacagaaaaaagaaaagaagggc
aagtctgatggtaaaaaggaaaagaaaaaggacacagaaatgcaaaagaacaaggaaaaa
aaggaaaaacacagaaataaagataagcataagaagaaagacaagaaagaggaggagaag
aaagatctttttgttattgatccatcaggaaacttgtattactactggctgttttgcatt
gcattacccgtcatgtacaactggaccatgatcattgcaagagcctgttttgacgaactt
cagaatgaccatttaggaatgtggttcatttttgattatatatcagatataatctatatt
gctgatatgtttgtacggacaagaacaggttatttggagcaaggtttgttggtgaaagac
gaacttaaacttaaacagagatatacaggaactttacaatttaaactagatctactgtca
gtcataccaactgatctactgtactttaaattaggtctgacctatccagaattaagaata
aacagaatacttaaagtatctcgtatgtttgagttcttccagcgaacagaaacaaggaca
aactatccaaatatcttcaggatctctactcttgtcatgtacatagtgattattattcac
tggaatgcatgtgtgtactattctatctccaaagccattggatttggggcagacacatgg
gtctatccaaacacctctgatcctgaatttgcccgtctggcgagaaaatatgtatatagc
ctctactggtcgacgctgaccttgaccactattggggaaacacctcctcctgtacaggat
tctgagtacttctttgtggttgttgacttcttggttggggtgttgatttttgctactatt
gttggtaacattggttctatgatctccaatatgaatgcagccagagcagagtttcaagga
aggattgatgctatcaagcagtatatgcactttcgaaatgtgaataaagaaatagaaaaa
agagttattaagtggttcgactacttgtggacaaataaaaaggcagtggatgaaagggaa
gttttaaaatatctaccagataaattaagagcagagattgcaatcagtgttcatctggac
acattaaagaaagttcgaatttttgcagactgtgaagctggcttgttagttgaattagtc
ttgaaactgcagcctcaagtctacagtccaggagattacatctgccgaaagggggacatt
ggacgagagatgtacattatcaaagaaggtaaacttgctgtagtagctgatgatggaatt
acacaatttgtggtcttaagtgatggcagctactttggggagattagcatacttaatatt
aaaggcagcaaagctggcaatcgaagaacagccaacattagaagcattggatactcagac
ttattttgtctatctaaagatgacctcgtggaggctttaatagaatacccagatgcaaag
gccctgctggaagagaaaggtaaggaaatcttgctgaaggacgggttactggatatagat
gttgcaaatacaggaagcgaccctaaaaacattgaagaaaaggtcattcaaatggaagga
gcagtggacaacttacaaaccaagcttgccaggcttttggctgagtatgatgccacacag
cagaaactgaaaaaacgactgacagaggttgagaaaatactgaaatcaactatgcagttt
gaattctcagatttagaagaattagataaataa
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